Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1597 ATGGAAGAAGGAACTCATGTAACCTTAAGTCTTCTGTTATTTGAACACAGGAAAATATGCTTTGGTGACTTTGAATGCAATGCTTTATTTGAACATAATATTGAGCTAAGTGATGAAAGTGTTGGACTAATGGTGCAGAAAGAGGAAGAACATTTACCTAAAGATGATTACTTCAAGAATCTTCATGATGGACACTTTAACTTGAGTGTTAGAAAACAAGCACTTGATTGGATGTTGAAGGCACATGCTTATCTTGGTTTTGGACCATGGACCATTTTTCTATCTGTGAACTACTTGGATAGGTTCCTATCACTATTTGAATTGCCAAGAAACAGAAATTGGATTTCGCAATTGGTAGCGGTAGCTTGTTTGTCAATTGCTGCTAAAATTGGGGAGACAAAGGTGCCTCTATCTACACGTTTACAGGTTGGGCCACCAAAGTTTGTATTTGAGGCTATAACCATTCAAACAATGGAACTATTGGTATTAAGCACATTGGAGTGGAAAATGCAAGCTTTAACACCATGTTCCTTCATAGACTACTTTATTAGTAAGATCAATTGTGAGCAGCATCAAATGAAGTCATGCCTATTGAAATCTTATGAGCTCATGCTAAGCATAACTAAATGTATTGCCTTTACTATCTTTACATTTTTAGTCTTTATGTGTGATCGATTTTCGCGAGTAATGAGTATTGATTTCTTGGAGTTCAAGTCTTCTGAGATTGCTGCAGCAGTGGCAATTTCTGTTACAAGGGAATTGGAAGCTAAAGAGATTCATAAGGCCTTATCTTCTTTGGTCATGGTAAAGGAGGAGAGAGTTTTGAAGTGTCTGGAAGTGATGAGAGATTTGTCATTGGTCAAAATTTCTGGTAACTTAACTCCATTTGTATCAGAAAGCCCAGTTTGTGTGTTGGATGGTGCATGCACTAGCTCTAAAACTGATAAATTAACAATTGGTTCATCTTCAAATTCTTCCAATCTTACTCCAAATACTGAGAAGCAATCAAATGCACCCTTGAGTCATGAAATCTTATAG 1038 0.3661 MEEGTHVTLSLLLFEHRKICFGDFECNALFEHNIELSDESVGLMVQKEEEHLPKDDYFKNLHDGHFNLSVRKQALDWMLKAHAYLGFGPWTIFLSVNYLDRFLSLFELPRNRNWISQLVAVACLSIAAKIGETKVPLSTRLQVGPPKFVFEAITIQTMELLVLSTLEWKMQALTPCSFIDYFISKINCEQHQMKSCLLKSYELMLSITKCIAFTIFTFLVFMCDRFSRVMSIDFLEFKSSEIAAAVAISVTRELEAKEIHKALSSLVMVKEERVLKCLEVMRDLSLVKISGNLTPFVSESPVCVLDGACTSSKTDKLTIGSSSNSSNLTPNTEKQSNAPLSHEIL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1597 345 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Lal15g1597 345 Gene3D - 54 171 - -
Lal15g1597 345 Pfam Cyclin, C-terminal domain 174 285 IPR004367 -
Lal15g1597 345 Pfam Cyclin, N-terminal domain 43 170 IPR006671 -
Lal15g1597 345 SUPERFAMILY Cyclin-like 34 170 IPR036915 -
Lal15g1597 345 MobiDBLite consensus disorder prediction 314 339 - -
Lal15g1597 345 PANTHER CYCLINS 37 213 IPR039361 -
Lal15g1597 345 PANTHER CYCLINS 230 337 IPR039361 -
Lal15g1597 345 PANTHER CYCLIN-D4-1-LIKE 230 337 - -
Lal15g1597 345 PANTHER CYCLIN-D4-1-LIKE 37 213 - -
Lal15g1597 345 SMART cyclin_7 76 164 IPR013763 -
Lal15g1597 345 CDD CYCLIN 71 163 IPR013763 -
Lal15g1597 345 MobiDBLite consensus disorder prediction 314 345 - -
Lal15g1597 345 Gene3D - 44 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1597 Lal-Chr15 17832566 17834735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1597 37 255 Core Cell Cycle Gene Families AT5G65420 47.964 1.30e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1597 K18810 - gmx:100794010 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1597 15 17832566 17834735 Lal16g1685 16 15823677 15827138 LSH
Lal16g0506 16 3197452 3200039 Lal15g1597 15 17832566 17834735 PCT
Lal15g0450 15 3048413 3051020 Lal15g1597 15 17832566 17834735 PCT
Lal15g1597 15 17832566 17834735 Lal16g0506 16 3197452 3200039 PCT
Lal15g1597 15 17832566 17834735 Lal15g0450 15 3048413 3051020 PCT