Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal15g1593 | ATGAAGGTGGTGGGTAATATGAAGAAGCCAGTGTTCTTGTTGTGGCAGTTTGGAATGACAATGCAACTCTTCTTGCTCATTGCATGTTGTGAGAGGACACCATTTAGAAGTTCAAGCGAAATCAACATATCCGAATCATCACCTCGTAGTCATGGAGTGAAGATGAACATAGAAAAAAATATGCATTTGGTAGTTGACAATGGCATTGTTAAAGTGACATTGTCAATTCCAGAGGGCTATGTCATTGGAATATCATATAATGGAATTGACAATATTCTTGACACTCAAAACAAGGAACATGATAGAGGGTACTTGGACATTTTTTGGAATGTCCCATCACAACACACAATCTATGAGAGGTACATTTTTCTAAGAGGTAATTCGGGATTTTATTCATATATAATATTTGATCGTCCTAAAGGATTACCAGCAGCAGAAGTTGATCAAATTAGGACTGTTTTTAAGCTCCAGGAAAATAGTAATGAAAAAGCAAGTGACAGGTTCAAATACATGGCTATAGCAAATGATAGGCAAAGAAATATGCCAACAATGAGAGATAGAAAATTTGGTGAAGCCTTGGCATACCGTGAAGCAGTTCTATTAACCAATCCATCTGATCCAAAATTGAAAGGAGAGGTGGATGACAAATATCAATATTCATGTGAGAACATAGACAACACTGTACATGGTTGGATTGATGTTGATTCTGATTCACCAGTGGGTTTTTGGATGATAACTCCAAGTAATGAGTTTCGTAATGGTGGACCCATTAAACAAGATCTCACTTCTCATGTTGGCCCTATTACCCTAAGTATGTTTGTGAGCACCCACTATGCTGGTAAAGAGGTAACTATGGAATTTAAAGACGGGGAGACATATAAGAAGGTTTTTGGTCCTATTTTTGTTTACCTTAACTCTGCTTCAACCAAAAACCAAGCACTCTCCCTTTGGTCAGATGCTGTGTTACAGAAATCCAAGGAAGTGAGAAAATGGCCATATGATTTTCCTAAATCAAAAGATTTCTTTCCATCCAATAAACGTGGAACTGTAATGGGAAGATTATATGTTCATGAAAGGTACAACAACATATTTAAGGGTGCTAGTAAGGCTTATATTGGTCTAGCTTTGCCTGGAGATGCAGGATCATGGCAAAAAGAAAGCAAGGGCTATCAATTCTGGACACGAGCTAACGGAGCTGGTAGTTTTACAATAAAAAATATTGTACCCGGAGTTTATAATTTATATGCATGGGTTCCCGGCTTCATTGGTGATTACAAATATAATGCTACCATTATCATTAAACCAGGAAGTGTAACCAACTTTAAGAAGTTAGTATACATTCCTCCAAGAAACGGACCAACTCTTTGGGAAATTGGAATCCCAGATCGCTCAGCTGCAGAATTTTATGTACCAGACCCCTACAATAACCTCTTGAACAAATTATACCAAGAACAACCTAAAGAGAAGTTTAGACAATATGGGTTATGGTCACGTTATACTGATTTATACCCAAAGCATGATCTAGTCTACACTGTTGGTGTTAGCAATTTTACTAAGGATTGGTTTTATGCTCAGGTTACAAGAGACACAGGAAAAAATACATATCTACCAACAACATGGGAAATTGTATTTGAACATCAACATGATGTTATTGGTGGCAATTACATGTTACAATTAGCCTTGGCATGTGCTGCTGAAGCTAAACTAGAGGTTCGGGTTAATAACCCTAATGTGAATCGACCCCACTTTAGCACAGGGCTAATACTTGGAGATAATGCCATTGTTAGGCATGGAATCCATGGATTGCATAGGCTATTCAACATTGTTGTTCCAAGTGGTCATTTTGTGAAAGGAAATAACACAATATATTTGAAGCAGATAGAAAACAAAGAACCTTGGCAAGGAGTTATTTCTTCTTATCGCCGCTCCCATTCTTCTGCTCTTGTTATTGGTTCTATACCTATCAGAGAAATCTACAGGTTTCAAGAGTCATTGCAAGATGAAACTGTTAGAATGAGTTGTTTAATTATTCCTGATAAAGCTGAAATTCCTAATGGGTTGGATAAATCCGCTTCTTCTATTGTGCGTGTGAGCTCTGTAGTGATGAGAAAACTTTCAGCACTGCAGTCAACTGACTCTGTTGATGCAATTGCCCTTATGAAAATTCCTGCCAGTTTTTTGGGTGTAGAAGGCAGTCTAAAGAAGGAAGACTGCCCGAAGTGGTTTCCATTGGCACGGCGGATTTTAGTCCTTGATGGGATTCAGGATCCTGGTAATCTTGGTACATTACTCAGATCTGCCGTGGCCTTTAGATGGGATGGAGTTTTTCTTCTTCCTGGCTGCTGTGATCCATTCAATGAGAAAGCTCTCCGAGCTAGCCGAGGTGCCTCCTTTCAGCTCCCTATAGTTTCTGGCAGTTGGAATCATCTTGAAGCTCTGAAAGAAGAATTTCAAATGAAGTTGCTTGCTGGGCATCCAGATCATGAAGGGTTAGGGAAGTGTATTTGTTTGCTTACTCCAACCTTCTGTGATTCTGTATCAAACACGCCATTGTGCTTGGTTTTAGGCAGTGAAGGAAGTGGCCTTTCAGAAAAGTCCCTTCAGGCATGTGAGCTTGTGAGCATTGAAATGGCCGGAGAATATGAGTCACTCAATGTCTCAGTTGCCGGTGGAATTTTCTTGTATATGCTACAGCCAAAGAATAGATGA | 2709 | 0.3917 | MKVVGNMKKPVFLLWQFGMTMQLFLLIACCERTPFRSSSEINISESSPRSHGVKMNIEKNMHLVVDNGIVKVTLSIPEGYVIGISYNGIDNILDTQNKEHDRGYLDIFWNVPSQHTIYERYIFLRGNSGFYSYIIFDRPKGLPAAEVDQIRTVFKLQENSNEKASDRFKYMAIANDRQRNMPTMRDRKFGEALAYREAVLLTNPSDPKLKGEVDDKYQYSCENIDNTVHGWIDVDSDSPVGFWMITPSNEFRNGGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMEFKDGETYKKVFGPIFVYLNSASTKNQALSLWSDAVLQKSKEVRKWPYDFPKSKDFFPSNKRGTVMGRLYVHERYNNIFKGASKAYIGLALPGDAGSWQKESKGYQFWTRANGAGSFTIKNIVPGVYNLYAWVPGFIGDYKYNATIIIKPGSVTNFKKLVYIPPRNGPTLWEIGIPDRSAAEFYVPDPYNNLLNKLYQEQPKEKFRQYGLWSRYTDLYPKHDLVYTVGVSNFTKDWFYAQVTRDTGKNTYLPTTWEIVFEHQHDVIGGNYMLQLALACAAEAKLEVRVNNPNVNRPHFSTGLILGDNAIVRHGIHGLHRLFNIVVPSGHFVKGNNTIYLKQIENKEPWQGVISSYRRSHSSALVIGSIPIREIYRFQESLQDETVRMSCLIIPDKAEIPNGLDKSASSIVRVSSVVMRKLSALQSTDSVDAIALMKIPASFLGVEGSLKKEDCPKWFPLARRILVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQLPIVSGSWNHLEALKEEFQMKLLAGHPDHEGLGKCICLLTPTFCDSVSNTPLCLVLGSEGSGLSEKSLQACELVSIEMAGEYESLNVSVAGGIFLYMLQPKNR | 902 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal15g1593 | 902 | CDD | RGL4_M | 346 | 444 | IPR029413 | - | |
| Lal15g1593 | 902 | Pfam | Rhamnogalacturonate lyase family | 118 | 213 | IPR010325 | - | |
| Lal15g1593 | 902 | Gene3D | - | 343 | 442 | - | - | |
| Lal15g1593 | 902 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 58 | 113 | - | - | |
| Lal15g1593 | 902 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 117 | 643 | - | - | |
| Lal15g1593 | 902 | CDD | SpoU-like_rRNA-MTase | 747 | 897 | - | - | |
| Lal15g1593 | 902 | Gene3D | - | 56 | 323 | IPR014718 | GO:0030246 | |
| Lal15g1593 | 902 | Pfam | SpoU rRNA Methylase family | 748 | 895 | IPR001537 | GO:0003723|GO:0006396|GO:0008173 | |
| Lal15g1593 | 902 | CDD | RGL4_N | 60 | 313 | - | - | |
| Lal15g1593 | 902 | SUPERFAMILY | Galactose mutarotase-like | 60 | 311 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal15g1593 | K18195 | - | gmx:100776664 | 839.336 |
Showing 1 to 1 of 1 entries