Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1588 ATGGGAGACGTGGCTAAGGATCTTACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATATGCGGGCACCCCTTTGACACCATTAAGGTCAAACTACAAAGCCAGCCTGCACCACTCCCTGGTCAGATTCCCATGTATTCTGGTGCCATTGATGCTGTCAAGCAGACAATAGCATCTGAAGGCTCAAGGGGTTTATACAAAGGTATGGGTGCCCCACTTGCTACAGTGGCGGTCTTCAATGCTGTGTTGTTTACAGTGAGAGGACAATTGGAAACAGTATTGAGGTCCCATCCTGGTGCCCCCCTCACAGTCACTCAGCAGTTTGTTTGTGGAGCTGGAGCTGGACTTGCTGTTTCCTTTCTCGCTTGCCCTACTGAACTCATCAAATGCAGGTTGCAAGCACAAGGTGCGCTTGCCGGCACAGCAACAGCTTCTGTTGGTGTGAAGTATGGAGGCCCCCTAGATGTTGCCAGGCATGTTCTTAGGTCAGAAGGGGGAACCAAAGGTCTTTTCAAGGGCTTGATTCCCACTATGGCACGTGAGATACCCGGAAATGCTATAATGTTCGGTGTATACGAAGCAGTAAAACAAATGTTTGCAGGAGGCACAGATACTTCTGGACTAGGTAGAGGTTCTCAGATTGTTGCTGGAGGCTTAGCTGGAGGCTCATTCTGGCTCTTGGTTTACCCAACTGATGTTGTCAAGAGTGTCCTTCAAGTAGACAATTGCAAAAATCCCAGGTTTTCTGGTTCATTAGATGCTTTTAGAAAGATTAAAGCTTCAGAGGGGTTCAAAGGCTTGTATAAGGGTTTTGGACCTGCAATGGGTCGAAGTGTTCCAGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGATGA 894 0.4832 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQIPMYSGAIDAVKQTIASEGSRGLYKGMGAPLATVAVFNAVLFTVRGQLETVLRSHPGAPLTVTQQFVCGAGAGLAVSFLACPTELIKCRLQAQGALAGTATASVGVKYGGPLDVARHVLRSEGGTKGLFKGLIPTMAREIPGNAIMFGVYEAVKQMFAGGTDTSGLGRGSQIVAGGLAGGSFWLLVYPTDVVKSVLQVDNCKNPRFSGSLDAFRKIKASEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1588 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lal15g1588 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lal15g1588 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lal15g1588 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lal15g1588 297 Pfam Mitochondrial carrier protein 212 296 IPR018108 -
Lal15g1588 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Lal15g1588 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Lal15g1588 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lal15g1588 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lal15g1588 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1588 Lal-Chr15 17787209 17789603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1588 22 291 Antiporters AT1G79900 33.091 5.08e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1588 K15109 - gmx:100787304 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1588 15 17787209 17789603 Lal16g1745 16 16466038 16472305 LSH