Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1583 ATGGGTTTCCGCTTACCTGCTATTCGAAGAGCATCATTCAGTTCCTGCCAAGAAGCATCAAAAAATGTAGAACACCCAAAGGGGTACCTTGCAATATATGTTGGAGAGAATCAGAAACGATTTGTGATCCCAATATCATATTTGAACCAATCTTCATTCCAAGACTTGTTGAGTCAAGCTGAGCAAGAGTATGGATATGATCATCCAAGGGGTGGTCTCACAATTCCTTGCAGTGAAAATGTCTTCCAAAATATTACATCTTGCATGAATAGATTGTAA 279 0.3907 MGFRLPAIRRASFSSCQEASKNVEHPKGYLAIYVGENQKRFVIPISYLNQSSFQDLLSQAEQEYGYDHPRGGLTIPCSENVFQNITSCMNRL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1583 92 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Lal15g1583 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lal15g1583 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1583 Lal-Chr15 17741101 17741379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1583 14 89 Calmodulin-binding Proteins AT3G43120 46.053 5.28e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1583 K14488 - gmx:100816803 152.14