Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1582 ATGGGTTTTCGCTTACCTGCTATTAGAAGGGCTTCATTCCAAGCAACTTCCAAGGCTGTGGAAGTTCCAAAAGGGTATCTTGCTATCTATGTTGGACAAAAAATGAAGCGGTTTGTAATTCCGATCTCATACTTGACTCAACCTTCATTTCAAGAATTACTAAACCAAGCTGAAGAGGAATTTGGATATGATCATCCTATGGGTGGTCTCACAATTCCTTGTGAGGAGGATGCTTTCTTAGACCTCATTTCTCACTTGACCAGACTATAA 270 0.4037 MGFRLPAIRRASFQATSKAVEVPKGYLAIYVGQKMKRFVIPISYLTQPSFQELLNQAEEEFGYDHPMGGLTIPCEEDAFLDLISHLTRL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1582 89 Pfam Auxin responsive protein 15 85 IPR003676 GO:0009733
Lal15g1582 89 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 87 - -
Lal15g1582 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1582 Lal-Chr15 17738847 17739116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1582 9 79 Calmodulin-binding Proteins AT3G43120 47.887 1.25e-19 76.3