Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1560 ATGAATAACTCCACTCCTTCTTCACAAGATCCACACCTTCACACCGATCACTATTTCCCTAACCCTATCCATCCCCAACCTCGCCCTAGTCCACGCCGTCCCCGCGGTTTCGCTGCCACCGCTGCGGCCAACAACTCCGCCGGTAAGGGGAAGAAAGAGAGGGAGAAAGAGAAAGAACGTACTAAGCTCCGGGAACGTCACCGCCGTGCTATCACCAGCCGTATGCTCACCGGCCTCCGTCAGTATGGCAATTTCCCCCTCCCGGCTCGCGCTGATATGAACGATGTGCTCGCCGCACTTGCTCGTGAAGCTGGTTGGGTTGTGGAGCCTGATGGAACCACTTATAGGCAGTCTCCACTTCCTTCTCAACTGGGATCATTTGAAGCAAGATCGGTTGAAAATCCACACCCTGCTGGCTCTTTGAGAGCTTGCACTGTTAAAGAAACACTAGAGAATCAGCCACATGTTTTTAGAATTGATGGAAGCATGTCACCTACATCTTCGGATGTAATTGCGGAAAGGGATTCGAAGAATGCAAGTGCAAGCCCCATCAATTCAGTTGACTGCTTAGAGGCTGATCAGCTTTTGCAACATATTCATTCAGGGGTAAATGAGAATGACTTTACTGGCACACCATATGTTCCTGTTTACATGAAGCTTCCTGTTGGTATTATAAACAAATTTTGCCAATTGATTGATCCTGAAGGCATTAGGCAGGAGCTAATCCATATGAAGTCTTTAAATATAGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCACAAAAATATGTCTGGTCTGGCCATAGGGAACTTTTTAATATTATTAGAGAATTCAAGCTGAAGTTGCAGGTTGTTATGGCATTTCATGAATGTGGAGGGAACGATTCTACTGATGCTTTGATTGCCCTCCCACAGTGGGTTTTAGAGATTGGAAAAGACAACAGGGATATATTCTTCACAGACCGTGAAGGACGAAGGAATACTGAATGCCTTTCTTGGGGCATTGACAAAGAGCGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTACTTTGACTTCATGAGAAGCTTTCGGACAGAGTTTGATGACTTGTTTGCAGAAGGTCTGATTTCTGCTGTAGAAATTGGACTTGGAGCATCTGGGGAACTGAAATACCCTTCTTTTTCGGAAAGGATGGGATGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTACACAGAGCAGCCAAATTTCGTGGTCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGAAACTACAATTCTATGCCACATGAAACTGGGTTCTTTTGTGATCGAGGAGATTATGACAACTATTATGGGCGTTTCTTCTTACATTGGTACTTCCAGACATTAATAGACCATGCAGATAATGTCTTGTCTCTTGCAAGCCTCGCGTTTGAGGAAACGAAAATAATTGTCAAGGTTCCTGCAGTATATTGGTGGTACAAGACCGCTAGTCATGCAGCAGAGCTAACAGCAGGATATCACAACCCGACGAATCAGGATGGTTACTCTCCTGTGTTTGAGGTTCTGAGAAAACATGATGTCACTGTTAAATTCATCTGCTTAGGAGTTCAGCTTTCTAGCCAGGAAGCTGATGAGTCATTGGCCGATCCAGAGGGTTTCAGTTGGCAGGTATTAAACTCAGCTTGGGATGGTGGGTTGATGACGGCTGGAGAGAATGCACTCCCGTGCTACGGTAGAGAAGGTTACAAGAGATTGGTTGAGATGGCAAAGCCCAGGAACGATCCTGACCGTCGACATTTTTCATTCTTTGTATACCAACAACCATCTTTGCTTCAGGGGAATGTTTGTTTGACAGAGTTGGATTTCTTCATCAAATGCTTGCACGGTGAAATGGCAGGAGATTTGTAA 1941 0.4549 MNNSTPSSQDPHLHTDHYFPNPIHPQPRPSPRRPRGFAATAAANNSAGKGKKEREKEKERTKLRERHRRAITSRMLTGLRQYGNFPLPARADMNDVLAALAREAGWVVEPDGTTYRQSPLPSQLGSFEARSVENPHPAGSLRACTVKETLENQPHVFRIDGSMSPTSSDVIAERDSKNASASPINSVDCLEADQLLQHIHSGVNENDFTGTPYVPVYMKLPVGIINKFCQLIDPEGIRQELIHMKSLNIDGVIVDCWWGIVEGWSPQKYVWSGHRELFNIIREFKLKLQVVMAFHECGGNDSTDALIALPQWVLEIGKDNRDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLHRAAKFRGHSFWARGPDNAGNYNSMPHETGFFCDRGDYDNYYGRFFLHWYFQTLIDHADNVLSLASLAFEETKIIVKVPAVYWWYKTASHAAELTAGYHNPTNQDGYSPVFEVLRKHDVTVKFICLGVQLSSQEADESLADPEGFSWQVLNSAWDGGLMTAGENALPCYGREGYKRLVEMAKPRNDPDRRHFSFFVYQQPSLLQGNVCLTELDFFIKCLHGEMAGDL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1560 646 MobiDBLite consensus disorder prediction 48 65 - -
Lal15g1560 646 SUPERFAMILY (Trans)glycosidases 208 641 IPR017853 -
Lal15g1560 646 MobiDBLite consensus disorder prediction 157 181 - -
Lal15g1560 646 PANTHER - 53 645 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 MobiDBLite consensus disorder prediction 159 181 - -
Lal15g1560 646 MobiDBLite consensus disorder prediction 1 65 - -
Lal15g1560 646 Pfam Glycosyl hydrolase family 14 232 612 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 Pfam BES1/BZR1 plant transcription factor, N-terminal 48 190 IPR008540 -
Lal15g1560 646 Gene3D Glycosidases 204 645 - -
Lal15g1560 646 PANTHER BETA-AMYLASE 8 53 645 - -
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 248 262 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 269 287 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 291 312 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 406 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 457 476 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 491 507 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 508 519 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 526 549 IPR001554 GO:0000272|GO:0016161
Lal15g1560 646 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 564 586 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1560 Lal-Chr15 17590062 17595837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1560 8 642 Glycoside Hydrolase AT5G45300 65.134 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal15g1560 Glyco_hydro_14 1.3e-85 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1560 K01177 - gmx:100777004 1088.94