Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1557 ATGATTATTGATATGCCTCCTTCCACAACCCTGAATATGAGAGCAAGAAGATCTTCCTTTAGCTCTAGCAATGGCAATGAGGATATTCCTGTACACAACTATGCTACTGACAACAATGGTGATGACGGATACGACAGTGATAGCTCCAATTTCGCACCACCCACATCATCAACTCCATCAATGGCTGTTCCAGCAGAACTCGCTGGAGCTGTACATTTGGTTGGCAGATTCCAGGTGGATGGGTTTGTAAAAATGATGCAGAAACAAATCCAATCTGCTGGGAAACGCGGATTTTTTTCTAAAAGATCTGTAGGTCCCCAAGTTCGAGAAAAATTTACATTTGAGGACATGCTGTGTTTCCAAAAGGAACCAATACCAACATCATTGCTTAAGATTAATGGCGATTTAATAAGTCGTGCAACAAAACTATTCCAGATGGTTTTGAAATATATGGGAATTGATTCATCTGATCATGTAACTCCAATAAGCTTTGATGAACGAGTTGAGCTTGTAGGGAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTTCGGGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGGCAATCGTTAATTAAAGCATGGGAGCTCATGTATTTATGTGCATCCTCCATGCCTCCTAGTAAAGACATCGGGGGTTATCTGTCAGAATATGTTCATAACATAGCACATGATGTGACTACTGATCCCGATATCCAAGCCCTGGCATTAAATACATTAAATGCTTTGAAGCGCTCGGTCAAGGCTGGTCCTAGGCATGTAATACCTGTGCGTGAGGAGATTGAAGCTTTGTTGACCGGGAGAAAGCTCACGACCATAGTGTTTTTCCTGGATGAAACTTTTGAAGAAATTACGTATGACATGTCCACAACAGTTGCTGATGCTGTCGAGGAACTTGCAGGACTCATTAAACTGTCAACATACTCTAGCTTTAGTTTGTTTGAATGTCAGGAGTATGTTGGGTTAGATGATAACAAATATATCGGGGATCTCCTGGCAGAATTTAAATCAGCAAAGGATCGAAGTAAGGGAGAAATCTTGCATTGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTAACAGATCCAATGTTTGTGATATTGTCTTACGTACAATTGCAACATGATTATATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTGCCAAGCTTTCTGCACTACAAATATTGACCGAGATTGGATTTGTTAGCACACCTGAATCAAGCACTGACTGGAATTCACTTTTGGAGCGATTCTTGCCTAGACAAATTGCAATGACACGAGCAAAACGTGAATGGGAGTTGGACATTCTTTCTCGTTATCATTCATTGGAGCATCTAACAAAAGATGACGCAAGACAACAATTTCTGCGTATATTGAGAGCACTCCCTTATGGGAGTTCTGTTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTGGGAATTAACAAAAGAGGGATTCATTTTTTCCGTCCAGTACCTAAGGAATATTTGCATTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATATTGCAGTGTTTTTTAAAATGCGAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTGGCTCTTCAGACACATATAAACGATGTAATGCTGCGCCGCTATTCGAAAGCACGATCTGCTGCTAGCGGTTCTTTGAATGGAGATATTTCTAATAGTTTTAAGCCTTCTAATTTGGAATTATATGAGAAACGTGTTGAAGATTTATCAAAACGGGTTGAAGATTCTCAAAGAAGTGTTGATCAATTGCTGGAAGAATTGCATGAGAAGCAAATGCAAGAAGAGAAAATGCAAGAAGAGTTGGAAGGCTTGAAAGAGTCCTTTAAAGCTGATAAGCAAAATCTTGAGGAAGTTACAAATGATCGTGATAGGCTTAGATCATTATGCATGGAAAAAGATAAAGCGCTTCAGGCTGCCATTCTAGAGAAAAGGAACGCAGAAGCAAGGATAGCCAAGTTGAATAATCTTGCAACAGAGAACACTGCCAAGAAGGGTCTTGTTGGAGGAAATAACCAAGTGTTTCAAAAGCTTGAAGACGAGCTAAAACTTTGTAAAGATAAGCTTCATGCAGCGGAAGAAACTATCAAAAGCTTGGCAAATGAAAAATTGATTTTGGAAGAGAAGTTATCTGCGCTTCAGAAGAGAACAGCTGACGAGGTTAGTTCTCTTCAACGGAAAGTTGAGCAAGAGCGTAAAGTTGTGAAGTCTCAAGTGAATGACTTGGAAAGAAAGCTAGAAGTGTTTAGACAAGACTTAGCGGCAGCTGAGTCTACTATTTCAGTCAAGACCTCTGAGTTAGCTGCATTGCACAATAATTTGAAGGAACTAGAAGAGTTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAGATGGAATTGCTTTATAAGGAAGAGCAGGTTTTAAGGAAACGTTATTTCAATACAATAGAAGATATGAAAGGCAAGATTAGAGTTTACTGCAGGCTAAGACCTCTTAACGAGAAAGAGATTGCTGATAAAGAAAGAGGAGCTGTTACGAAGGTAGACGAGTTTACAGTTGAACATTCATGGAAAGATGATAAACTGAAGCAGCATGTATATGATCGTGTGTTTGGTGGTGATGCAACTCAAGAAAGTTATTTGGTGCAATCCGCTGCAGATGGTTATAATGTCTGCATTTTTGCATATGGTCAAACCGGCTCGGGGAAGACATTTACAATCTACGGAAGTGAAAACAACCCTGGGCTTACCCCTCGCGCTACTGCAGAACTTTTTAGAATTATAAGGAGAGATAATAACAAGTATTCTTTTTCCTTGAAGGCTTACATGGTGGAATTATACCAAGACACCCTTATAGATCTTTTGTTACCTAAGAATGCAAAGCATTTAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGCTGTGGAAAATGTAACAGTTGTGTCAATTTCTACCATAGAAGAATTGAATAGCATAATACAAAGAGGATCCGAACGGCGGCATATATCTGGGACGCATATGAATGAAGAAAGTTCAAGATCTCATCTTATTCTATCAATTGTAATTGAAAGTACCAATCTCCAAAGTCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCCGGTTCAGAAAGAGTGAAAAAGTCGGGTTCAGCGGGTAGTCAACTCAAGGAAGCTCAAAGTATCAACAAATCGTTATCGGCGCTTGCAGATGTTATTAGTGCCTTGTCTTCTGGTGGTCAACACATACCCTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAGCTTGGATGAGACACATAACTCTCTAATGTATGCATCAAGAGTGAGATCAATTGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAGATTGAAGAAGTTGGTTGCATATTGGAAAGAACAAGCTGGTAGAAGAGGTGAGGATGAAGATTTAGAAGAAATTCAAGAAGAAAGGCCAACTAAAGTAGGCAAATAG 3735 0.3922 MIIDMPPSTTLNMRARRSSFSSSNGNEDIPVHNYATDNNGDDGYDSDSSNFAPPTSSTPSMAVPAELAGAVHLVGRFQVDGFVKMMQKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKEPIPTSLLKINGDLISRATKLFQMVLKYMGIDSSDHVTPISFDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQSLIKAWELMYLCASSMPPSKDIGGYLSEYVHNIAHDVTTDPDIQALALNTLNALKRSVKAGPRHVIPVREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECQEYVGLDDNKYIGDLLAEFKSAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVILSYVQLQHDYILGNYPIGRDDAAKLSALQILTEIGFVSTPESSTDWNSLLERFLPRQIAMTRAKREWELDILSRYHSLEHLTKDDARQQFLRILRALPYGSSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNIAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAASGSLNGDISNSFKPSNLELYEKRVEDLSKRVEDSQRSVDQLLEELHEKQMQEEKMQEELEGLKESFKADKQNLEEVTNDRDRLRSLCMEKDKALQAAILEKRNAEARIAKLNNLATENTAKKGLVGGNNQVFQKLEDELKLCKDKLHAAEETIKSLANEKLILEEKLSALQKRTADEVSSLQRKVEQERKVVKSQVNDLERKLEVFRQDLAAAESTISVKTSELAALHNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLNEKEIADKERGAVTKVDEFTVEHSWKDDKLKQHVYDRVFGGDATQESYLVQSAADGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRIIRRDNNKYSFSLKAYMVELYQDTLIDLLLPKNAKHLKLDIKKDSTGMVAVENVTVVSISTIEELNSIIQRGSERRHISGTHMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSAGSQLKEAQSINKSLSALADVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQEERPTKVGK 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1557 1244 Coils Coil 608 670 - -
Lal15g1557 1244 Coils Coil 723 764 - -
Lal15g1557 1244 Coils Coil 773 845 - -
Lal15g1557 1244 ProSitePatterns Kinesin motor domain signature. 1095 1106 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal15g1557 1244 Gene3D - 373 484 IPR014352 -
Lal15g1557 1244 Gene3D - 1198 1243 - -
Lal15g1557 1244 Gene3D MyTH4 domain 99 281 IPR038185 -
Lal15g1557 1244 CDD FERM_C_KCBP 488 593 - -
Lal15g1557 1244 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 602 1241 - -
Lal15g1557 1244 PANTHER KINESIN-RELATED 602 1241 IPR027640 GO:0003777|GO:0007018
Lal15g1557 1244 SUPERFAMILY Second domain of FERM 368 485 IPR035963 -
Lal15g1557 1244 MobiDBLite consensus disorder prediction 11 58 - -
Lal15g1557 1244 CDD KISc_C_terminal 878 1197 - -
Lal15g1557 1244 Gene3D - 283 372 - -
Lal15g1557 1244 Pfam Kinesin motor domain 886 1195 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 880 1223 IPR027417 -
Lal15g1557 1244 SMART B41_5 280 490 IPR019749 -
Lal15g1557 1244 Pfam MyTH4 domain 173 277 IPR000857 GO:0005856
Lal15g1557 1244 MobiDBLite consensus disorder prediction 1221 1244 - -
Lal15g1557 1244 SMART MyTH4_1 120 279 IPR000857 GO:0005856
Lal15g1557 1244 Pfam FERM central domain 376 490 IPR019748 -
Lal15g1557 1244 SMART kinesin_4 878 1203 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 ProSiteProfiles MyTH4 domain profile. 120 279 IPR000857 GO:0005856
Lal15g1557 1244 PRINTS Kinesin heavy chain signature 946 967 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 PRINTS Kinesin heavy chain signature 1065 1082 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 PRINTS Kinesin heavy chain signature 1096 1114 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 PRINTS Kinesin heavy chain signature 1145 1166 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 SUPERFAMILY PH domain-like 490 578 - -
Lal15g1557 1244 MobiDBLite consensus disorder prediction 1 58 - -
Lal15g1557 1244 Gene3D Kinesin motor domain 821 1196 IPR036961 -
Lal15g1557 1244 ProSiteProfiles Kinesin motor domain profile. 880 1195 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1557 1244 ProSiteProfiles FERM domain profile. 284 584 IPR000299 GO:0005856
Lal15g1557 1244 Coils Coil 685 712 - -
Lal15g1557 1244 Gene3D - 486 596 IPR011993 -
Lal15g1557 1244 CDD FERM_B-lobe 387 483 IPR019748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1557 Lal-Chr15 17564624 17574127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1557 55 1241 Calmodulin-binding Proteins AT5G65930 73.719 0.0 1834