Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1551 ATGATTAGAGTTTGGCTTGTGGTTTTGATGGTTCTCTCCAATGGGTTCTCTTCAAATGGAATTGGTATGGATAATTTCACGATACCTGATTATGTAAATATCGGTGTTCTCTACTCTTTCAATACTAGTGTTGGTAGAATTGTCAAGATTGCTATAGAAGCTGCGGTTGAAGATATAAATTCTGATCCATCTATTCTTAGTAAAACTAAGCTGAAGGTCTCACTACAAGAAGATTCCAAATACAGAGGTTTTTTGAGCATTGCTGAGGCCTTGCAGCTCATGGCGACACACACCGTAGCCATAATCGGCCCTCAAACATCTACAACTGCCCATGTAATATCACATATTGCGAACGAGCTTCAAGTTCCTCTGCTATCATTTTCAGCCACTGACCCTACCTTATCTTCACTTCAATTCCCATTCTTTATTAGAACTGCTTTTAGTGATATTTATCAAATGACTGCAATAGCAGACCTTGTTAAATTCTATGGGTGGAGAGAAGTTATCGCAGTCTATGGTGATGATGACCATGGAAGGAATGGAATGGGTGCATTAGGGGATAAGCTTGCTGAAAGACGTTGCAAGATATCATTTAAAGCACGTATGAATCCTGAGGCAACCAGGGAGGAGATTACAGACGTGCTGGTTCAGGTGGCTCTGGCAGAATCACGCGTTATAGTTCTTCACACAAGTACTGCTTGGGGACCAAAAGTGTTTAGTGTGGCAAAGTCTCTTGGAATGATGGAAAATGGGTATGTTTGGATAGCCACCAATTTTCTGTCTACTCGGCTCGACATCGATAGTCCTCTTTCTTCAGATGTAATGGATGAAATTCAAGGAGTTATTACTCTACGTATGTACATACCAGATTCAGAGCACAAAAGATTATTTACTTCTAGGTGGAAAAATTTGATCAGTGGAAAGACTGCTAATGGTTCCCTCGGGCTGAGTACTTATGGTATCTTTGCATATGATACTGTTTATGTGCTTGCCCGTGCACTCGATACATTTTTCAAACAAGGGAACCAAATAACATTTTCATTTGATTCGAAGTTATCTCAACTACGTGGAGATAACATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGAAAATTGTTGTGTAAAAGTATTTATGAGGTTAACATGACTGGTGTATCAGGTCCATTCAAGTATACAACTGATGGAGACATTGTTAATCCAGCATATGAAATCATCAATGTGATTGGAACAGGGACTCGGAGGGTTGGTTATTGGTCTAATTTCTCTGGATTATCAATCGTTCCTCCAGAAACACTTTATTCAAAACCACCTAGTCGTTCCAGCGTAAGCCAGAAGCTACTCACTGTAATTTGGCCAGGAGAAACCGTCGAAAAGCCTCGTGGTTGGGTTTTCCCAAACAACGGAAGGCTGTTAAAAATTGGAGTACCAACAAGGGTTAGTTACCATCAATTTGTCTCGCAAGTACAAGGTACTGACATGTTCCAGGGATTCTGCATCGATGTCTTTCTTTCTGCAATAAATTTGTTGCCCTATGCTGTCCCCTACAAATTTATCCCGTATGGGGATGGTCAGAGAAATCCTAGTAACACTGAGCTTCTCCGTCTAATCACCTCGGGCGTCTTTGATGCAGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAACCATATATTGAGTCTGGTCTAGTGGTAGTAGCAGCAGTTAAGACGACAGAATCCAATGCTTGGGCATTTTTTACACCATTTACACCAATGATGTGGACTGTCACAGCTATCTTTTTCTTAGTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTCAATGATGATTTTAGGGGACCCCCCAGAAAACAAATAATAACAACATTGTGGTTTAGCTTTTCAACTATGTTCTTTGCCCACAGGGAGAATACTGTGAGCACTCTTGGTCGCTTTGTGCTACTTATATGGTTATTTGTAGTTCTTATAATTAATTCGAGTTACACGGCAAGCTTGACTTCAATCCTTACGGTGCAACAACTTTCTTCACCCATTAAAGGCATTGAAAGTTTAATAAATAGCAAAGAGCCTATTGGCTACTTGCAGGGTTCTTTTACTCGAAATTATTTAATTGGAGAAATTGGTATTGATGAGTCCAGGCTTATTCCTCTAAAGACAGCAGAAGAATCTACGAAAGCACTAGAAAAAGGTCCTCGTAAGGGTGGCATTGCGGCATATGTTGATGAGCGTGCTTACATAGAGCTTTTCCTTTCAAGCCAGTGTGGTTTTACTGTTGTTGGTCAAGAGTTCACAAGAAATGGTTGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCCGTTGATATGTCCACTGCGATTTTGGAGTTAGCAGAGAATGGAGATTTACAAAGGATCCATGACAAATGGCTTTTGAACAGAGCTTGTCTATCACAAGGTGAAAAGTTTGAAGTTGACAGACTCAACCTTAAAAGCTTCTGGGGCCTCTATCTATTATGTGGATCAGCATGTTTACTTGCTCTCTTCATATACCTTATTCAGACCTTGAAGCAGTACAATAAGCACTGCCCAATGGAACCTGAGCCTTCTTCCGGCCAAGGCTCCTCCCGATCTTCACATTTCCGGACTTTCCTTTCGTTCGCAGATGAAAAAGAAGAGATAGTTAAGAGGCGCTCCAAGCGAAGGCAAATGGAGAGAATATCATACAGAAGCACAAGTGAGGTTGGTTCTTCCATCAGCAATACAGAATATTGTCAGTCATCTTTGAACAGAATTGATTCTACTAATGAAGTCTAA 2820 0.4071 MIRVWLVVLMVLSNGFSSNGIGMDNFTIPDYVNIGVLYSFNTSVGRIVKIAIEAAVEDINSDPSILSKTKLKVSLQEDSKYRGFLSIAEALQLMATHTVAIIGPQTSTTAHVISHIANELQVPLLSFSATDPTLSSLQFPFFIRTAFSDIYQMTAIADLVKFYGWREVIAVYGDDDHGRNGMGALGDKLAERRCKISFKARMNPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVFSVAKSLGMMENGYVWIATNFLSTRLDIDSPLSSDVMDEIQGVITLRMYIPDSEHKRLFTSRWKNLISGKTANGSLGLSTYGIFAYDTVYVLARALDTFFKQGNQITFSFDSKLSQLRGDNMHLDAVKIFNEGKLLCKSIYEVNMTGVSGPFKYTTDGDIVNPAYEIINVIGTGTRRVGYWSNFSGLSIVPPETLYSKPPSRSSVSQKLLTVIWPGETVEKPRGWVFPNNGRLLKIGVPTRVSYHQFVSQVQGTDMFQGFCIDVFLSAINLLPYAVPYKFIPYGDGQRNPSNTELLRLITSGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAAVKTTESNAWAFFTPFTPMMWTVTAIFFLVVGAVVWILEHRLNDDFRGPPRKQIITTLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLINSKEPIGYLQGSFTRNYLIGEIGIDESRLIPLKTAEESTKALEKGPRKGGIAAYVDERAYIELFLSSQCGFTVVGQEFTRNGWGFAFPRDSPLAVDMSTAILELAENGDLQRIHDKWLLNRACLSQGEKFEVDRLNLKSFWGLYLLCGSACLLALFIYLIQTLKQYNKHCPMEPEPSSGQGSSRSSHFRTFLSFADEKEEIVKRRSKRRQMERISYRSTSEVGSSISNTEYCQSSLNRIDSTNEV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1551 939 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Lal15g1551 939 PIRSF IGluLR_plant 1 938 IPR017103 -
Lal15g1551 939 Gene3D - 467 582 - -
Lal15g1551 939 Gene3D - 583 708 - -
Lal15g1551 939 Gene3D - 709 815 - -
Lal15g1551 939 Pfam Bacterial extracellular solute-binding proteins, family 3 527 812 IPR001638 -
Lal15g1551 939 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Lal15g1551 939 CDD GluR_Plant 472 812 - -
Lal15g1551 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Lal15g1551 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Lal15g1551 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 323 335 - -
Lal15g1551 939 PANTHER GLUTAMATE RECEPTOR 10 928 - -
Lal15g1551 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 928 - -
Lal15g1551 939 Gene3D - 50 400 - -
Lal15g1551 939 Gene3D - 148 425 - -
Lal15g1551 939 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Lal15g1551 939 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Lal15g1551 939 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Lal15g1551 939 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1551 Lal-Chr15 17524663 17529568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1551 5 915 Ion Channels AT3G51480 58.662 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1551 K05387 - gmx:100788917 1573.53