Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1545 ATGGGTCTTTGCTTTTCCTCTCTATTCTCTTCTCCTTCTAATCCAAACTCATCTTCCCTCAAAACCCCTCACTTTTCAGCCACCACGACTGCTTCAACGAGCAGTGGGGTGAAAAGTCAGTTTTCAGAGATAGGGAGTGGAAGCATTGATGGTGGTGGTGGGTCCCAAAATCAAGATGAAGATAAGATTGTGGAGAGGCCAAACTTGAAGGTGTTCAGTTTTGGGGAATTGAAATCAGCAACAAAGGGTTTCAGGTCAGATACATTGTTAGGTGAAGGTGGTTTTGGTAAAGTCTATAAAGGATGGTTAGATGAGAAAACACTCAATCCTGCTAAATCTGGCACTGGAATTGTTGTTGCCATCAAAAAATTGAATCAAGAAAGCACACAAGGCTTTCAAGAGTGGCAGTCAGAAGTCAACTTTCTAGGAAGGCTTTCTCACCCGAACCTGGTCAAGCTATTGGGTTACTGTTGGGACGATGATGAGCTTCTTCTCGTGTACGAGTTCTTGCCGAAGGGAAGCTTGGAGAATCATCTTTTCCGAAGAAATCCTAACATAGAACCACTTTCCTGGAACGCCCGAATTAAAATAGCTACCGGTGCAGCTAGGGGTTTAGCTTTTTTGCACAGTTCCGAAAAGCAAATCATATACAGAGATTTCAAGGCCTCAAATATACTACTCGATGGGAATTATAATGCAAAATTATCAGACTTTGGGTTAGCTAAATTGGGGCCTTCTGCGGGTGAATCACACGTAACTACTAGGGTCATGGGCACGTATGGCTATGCTGCTCCAGAATACATTGCAACTGGCCACTTGTATGTGAAGAGTGATGTGTACGGCTTTGGTGTGGTGCTGCTCGAAATTCTGACCGGAATGCGGGCGCTTGATACCAAGCGGCCAACAGGGCAGCAGAACCTGGTTGAATGGGTTAAGCCTAATCTCTACAATAAAAAGAAGTTGAAAACTATCATGGATGCTAGGATAGAAAGCCAATATTCATTCAAGGCAGCATTGCAAGCGGCACAGCTTACTCTAAAATGCCTAGAACATGACCCTAGGAACCGTCCTTCTATGAAAGAAGTAGTCGAGTCATTGGAAGGTATCGAAGCTATTCAGGACAAATCAAAGGAATCCAAGAACCGCAAAATGAGGTCGGCAGCCATTCAACATCCACAGCAGCACGGTCGTGCTCGCCAGAGAGTTACTTGA 1212 0.4455 MGLCFSSLFSSPSNPNSSSLKTPHFSATTTASTSSGVKSQFSEIGSGSIDGGGGSQNQDEDKIVERPNLKVFSFGELKSATKGFRSDTLLGEGGFGKVYKGWLDEKTLNPAKSGTGIVVAIKKLNQESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFLPKGSLENHLFRRNPNIEPLSWNARIKIATGAARGLAFLHSSEKQIIYRDFKASNILLDGNYNAKLSDFGLAKLGPSAGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRALDTKRPTGQQNLVEWVKPNLYNKKKLKTIMDARIESQYSFKAALQAAQLTLKCLEHDPRNRPSMKEVVESLEGIEAIQDKSKESKNRKMRSAAIQHPQQHGRARQRVT 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1545 403 Gene3D Phosphorylase Kinase; domain 1 55 169 - -
Lal15g1545 403 ProSiteProfiles Protein kinase domain profile. 84 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1545 403 CDD STKc_IRAK 90 369 - -
Lal15g1545 403 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 41 381 - -
Lal15g1545 403 MobiDBLite consensus disorder prediction 9 60 - -
Lal15g1545 403 MobiDBLite consensus disorder prediction 9 55 - -
Lal15g1545 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lal15g1545 403 PANTHER OS01G0588500 PROTEIN-RELATED 41 381 - -
Lal15g1545 403 Pfam Protein tyrosine and serine/threonine kinase 88 366 IPR001245 GO:0004672|GO:0006468
Lal15g1545 403 ProSitePatterns Protein kinases ATP-binding region signature. 90 123 IPR017441 GO:0005524
Lal15g1545 403 SUPERFAMILY Protein kinase-like (PK-like) 64 367 IPR011009 -
Lal15g1545 403 Gene3D Transferase(Phosphotransferase) domain 1 170 394 - -
Lal15g1545 403 MobiDBLite consensus disorder prediction 373 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1545 Lal-Chr15 17491864 17496752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1545 55 366 Glycoside Hydrolase AT3G07070 50.000 2.52e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal15g1545 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1545 - - gmx:100794193 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1545 15 17491864 17496752 Lal15g1545 15 17491864 17496752 ECH