Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1536 ATGGTTAAATCTGATAACACCAATTCCAATTCAATCATTCCCAGAAACTTCAAAGATTCTGGACAGAACAGAAGAGCATTGAGTGTTATCAATCAGAATCTATTGCAAGGTCAACAATATCCTCGTGTTATTCAAAAGAGAGTGTTACCTGAAAAACTTGGAATACGTGAAAAGAAGCAGGCAGATTCATCACATCGACCCATCACAAGGAGATTTGCTTCCCAAGTTATTAGCAAGCAGAAATCTTGCACTCAGGAACCGATGAAGTCAACATCGGCAGTTTCAAGTTCAAATGGATTTGAAAACACTGTGATCACAGAAGATGAACTCAAGTCAGTAGCAGACCAACCAGCACCCATGTCTTTGGAGCAATCAGAACCAATCAATAGTGATCCAAATCAGATGGAGGAAGTTGAGATGGAGGATATAGCCGAAGTGCCTATTTTGGACATCGATAGCGGTGATGCGAATAATCCTCTTGCAGCAGTGGAATATATTAAAGATCTCCATTCCTATTACAGAAGAGTCGAGAGTATTAGCCGCGTCTCACCAAATTATATGGCACAACAATTTGACGTTAATGAAAAGATGAGGGCTATACTAATTGAATGGCTTATTGAGGTGCACGATAAATTGGACCTCGTGCAAGAGACATTGTTTCTTACGATTAATCTCATAGACAGATTTTTGGAAAAGCAGACATTAGTAAGAAAGAAGCTTCAGTTGGTTGGTATGGTTGCCTTGCTTCTAGCATGCAAGTACGAGGAAGTTTCTGTGCCCGCGGTTGGGGATTTCGTCGGTTTATCAGACAATGCATACTCAAGGAAGGAAGTCCTGGAAATGGAGAGGTTAATGCTAAATACTTTGCAGTTCAACATGTCTGTGCCAACAGCCTACGTGTTTACACGAAGATTCCTGAAGGCGGCTGAAGCCGATAAAAGAGTCATCCCTTCCATGGAACAGCTTGAGCTACTAGCTTTTTTCTTGATAGAGCTATCCCTATTGGAATATGAGATGCTGAAGTTCTCACCATCTATGCAAGCTGCAGCTGCAGTCTACGCAGCTCAGTGTACTGTCAATGGTTTCAAACGGTGGAATCGGAAATGCGAATGGCATTCGACTTACTCAGAAGATCAGCTATTAGAGTGCTCTCTTATGATGGTTGTGTTACACCAGAAGTCGGCGACAGCGAAACTTAATGGGGTGCATAGGAAGTATTGCTCATCCAAGTATGCCTATACTGCACTATGTGAAGCAGCACATTTTCTTCTGCAGTAG 1278 0.4202 MVKSDNTNSNSIIPRNFKDSGQNRRALSVINQNLLQGQQYPRVIQKRVLPEKLGIREKKQADSSHRPITRRFASQVISKQKSCTQEPMKSTSAVSSSNGFENTVITEDELKSVADQPAPMSLEQSEPINSDPNQMEEVEMEDIAEVPILDIDSGDANNPLAAVEYIKDLHSYYRRVESISRVSPNYMAQQFDVNEKMRAILIEWLIEVHDKLDLVQETLFLTINLIDRFLEKQTLVRKKLQLVGMVALLLACKYEEVSVPAVGDFVGLSDNAYSRKEVLEMERLMLNTLQFNMSVPTAYVFTRRFLKAAEADKRVIPSMEQLELLAFFLIELSLLEYEMLKFSPSMQAAAAVYAAQCTVNGFKRWNRKCEWHSTYSEDQLLECSLMMVVLHQKSATAKLNGVHRKYCSSKYAYTALCEAAHFLLQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1536 425 SUPERFAMILY Cyclin-like 295 419 IPR036915 -
Lal15g1536 425 PANTHER CYCLIN-B2-1 16 422 - -
Lal15g1536 425 Pfam Cyclin, N-terminal domain 169 294 IPR006671 -
Lal15g1536 425 SMART Cyclin_C_2 296 420 IPR004367 -
Lal15g1536 425 PIRSF Cyclin_A_B_D_E 2 425 IPR039361 -
Lal15g1536 425 Gene3D - 168 413 - -
Lal15g1536 425 SUPERFAMILY Cyclin-like 157 293 IPR036915 -
Lal15g1536 425 SMART cyclin_7 300 389 IPR013763 -
Lal15g1536 425 SMART cyclin_7 203 287 IPR013763 -
Lal15g1536 425 MobiDBLite consensus disorder prediction 77 99 - -
Lal15g1536 425 PANTHER CYCLINS 16 422 IPR039361 -
Lal15g1536 425 CDD CYCLIN 294 388 IPR013763 -
Lal15g1536 425 Gene3D - 182 294 - -
Lal15g1536 425 CDD CYCLIN 197 286 IPR013763 -
Lal15g1536 425 Pfam Cyclin, C-terminal domain 296 416 IPR004367 -
Lal15g1536 425 ProSitePatterns Cyclins signature. 198 229 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1536 Lal-Chr15 17446458 17451054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1536 20 424 Core Cell Cycle Gene Families AT1G20610 52.812 4.60e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1536 K21777 - gmx:100798068 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0787 16 5108307 5111193 Lal15g1536 15 17446458 17451054 LSH
Lal15g1536 15 17446458 17451054 Lal23g0841 23 10809905 10811318 LSH