Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1515 ATGGGAGAAACACAAAGAGAGATAGTATCAGCATTGAAGAAGGAAGAAGATTCAAAAGAAGAATCACAGGCTCAATTGGATATATGGAAGTACATATTTGGGTTTGTGGAACAAGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAAGCAATGGAGGACCTATGACACTCTCTGAGATATCATCAACTCTAGGGTGTGATCCTTCCCTTCTTTACCGCATCATGAGATTCTTAACTCATAGGAATATATTCAAAGCCATACCCACCAACACAGGCACCAACAACCATGGCTATTCCTATGCACAAACACCTCTTTCTCGTTTTTTGATGAGAAATGATAAACACAGCATGGCTTCTTTCATTCTTCTTGAAAGTAGTCCTGTGATGCTAGCACCATGGCATAGTCTAAGTGCTTGTGTTTTGGCTAATGGAAATACCTCATTTGAAAAAGCTCATGGTCAAGATGTATGGAAATATGCTGCTGCAAACCTTGATCATAGTAATCTCATCAATGATGCAATGGCATGCCATGCTAATCTAACTGTGCCTGCTATTATTGAAGGTTACAGTGAGGCTTTTGATGGAATAAATAACTTAGTAGATGTGGGTGGTGGAAATGGCACAGCCATGAGTATTGTGGTTAAGGCTTGTTCTTGGATAAGAGCAATCAACTTTGATCTTCAACATGTCATTGCTGAGGCCCCAGAGATTGAAGGAGTGGAACATGTGGCTGGTGACATGTTTGTACAAGTTCCAGAAGCTGATGCTGCTTTTATTATGGCAGTTTTGCATGATTGGGGAGATGAAGAGTGCATTGAAATCTTAAAAAAGTGTAGGGAAGCAATTCCAAAGGAAAATGGAAGGGTTATTATTGTGGAAGTAGTAATTGAAGAAGGAGGGAATAAAGAGAAGTTAAAGGACACAAGATTAATGTTAGATATGGTAATGATGGCACATACTAACTTTGGAAAAGAGAGGACACTAAAAGAATGGAATCATGTTATCAAAATGGCTGGATTTAGCACATACACTGTGAAAGCCATAAAGAATATTGTGAATTATGTTATTATGGCTTTTCCATGA 1098 0.3889 MGETQREIVSALKKEEDSKEESQAQLDIWKYIFGFVEQAVVKCAIELGIAEAIESNGGPMTLSEISSTLGCDPSLLYRIMRFLTHRNIFKAIPTNTGTNNHGYSYAQTPLSRFLMRNDKHSMASFILLESSPVMLAPWHSLSACVLANGNTSFEKAHGQDVWKYAAANLDHSNLINDAMACHANLTVPAIIEGYSEAFDGINNLVDVGGGNGTAMSIVVKACSWIRAINFDLQHVIAEAPEIEGVEHVAGDMFVQVPEADAAFIMAVLHDWGDEECIEILKKCREAIPKENGRVIIVEVVIEEGGNKEKLKDTRLMLDMVMMAHTNFGKERTLKEWNHVIKMAGFSTYTVKAIKNIVNYVIMAFP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1515 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 365 IPR016461 GO:0008168
Lal15g1515 365 PIRSF O-mtase 6 365 IPR016461 GO:0008168
Lal15g1515 365 Pfam O-methyltransferase domain 138 346 IPR001077 GO:0008171
Lal15g1515 365 Gene3D Vaccinia Virus protein VP39 115 364 IPR029063 -
Lal15g1515 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 360 IPR029063 -
Lal15g1515 365 PANTHER O-METHYLTRANSFERASE 14 357 IPR016461 GO:0008168
Lal15g1515 365 Gene3D - 9 114 IPR036388 -
Lal15g1515 365 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 14 357 - -
Lal15g1515 365 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Lal15g1515 365 SUPERFAMILY "Winged helix" DNA-binding domain 18 118 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1515 Lal-Chr15 17280729 17284594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1515 1 350 Monolignol Biosynthesis Gene Families AT5G54160 33.521 1.52e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1515 K22588 - gmx:100782951 478.789