Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1514 ATGAGAGAAACACAAAGAGAGATAGTATCAGCATTGAAGAAGGAAGAAGATTCAGAAGAAGATTCAGAAGAAGAATCACAGGCTCAATTGGATATATGGAAGTACATATTTGGGTTTGTGGAACAAGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAAGCAATGGAGGACCTATGACACTCTCTGAGATATCATCAACTCTAGGGTGTGATCCTTCCCTTCTTTACCGCATCATGAGATTCTTAACTCATAGGAATATATTCAAAGCCATACCCACCAACACAGGCACCAACAACCATGGCTATTCCTATGCACAAACACCTCTTTCTCGTTTTTTGATGAGAAATGATAAACACAGCATGGCTTCTTTCATTCTTCTTGAAAGTAGTCCTGTGATGCTAGCACCATGGCATAGTCTAAGTGCTTGTGTTTTGGCTAATGGAAATACCTCATTTGAAAAAGCTCATGGTCAAGATGTATGGAAATATGCTGCTGCAAACCTTGATCATAGTAATCTCATCAATGATGCAATGGCATGCCATGCTAATCTAACTGTGCCTGCTATTATTGAAGGTTACAGTGAGGCTTTTGATGGAATAAATAACTTAGTAGATGTGGGTGGTGGAAATGGCACAGCCATGAGTATTGTGGTTAAGGCTTGTTCTTGGATAAGAGCAATCAACTTTGATCTTCAACATGTCATTGCTGAGGCCCCAGAGATTGAAGGAGTGGAACATGTGGCTGGTGACATGTTTGTACAAGTTCCAAAAGCTGATGCTGCTTTTATTATGGCTGTTTTGCATGATTGGAAAGATGAAGAGTGCATTCAAATCTTAAAGAAGTGTAGGGAAGCAATTCCAAAGGAAAATGGAAGAGTTATTATTGTGGAAGTAATAATTGAAGAAGAAGGGAATCATGATAAGTTAAAAGATACAAGATTGATGTTGGATATGATAATGATGGCACACACCAACTTTGGAAAAGAGAGGACACTTAAAGAATGGGATCATGTTATCAAAATGGCTGGATTCAGCACATACACTGTCAAATCCATAAAGAATACTGTGAATTTTGTTATTATGGCTTTTCCATGA 1110 0.3865 MRETQREIVSALKKEEDSEEDSEEESQAQLDIWKYIFGFVEQAVVKCAIELGIAEAIESNGGPMTLSEISSTLGCDPSLLYRIMRFLTHRNIFKAIPTNTGTNNHGYSYAQTPLSRFLMRNDKHSMASFILLESSPVMLAPWHSLSACVLANGNTSFEKAHGQDVWKYAAANLDHSNLINDAMACHANLTVPAIIEGYSEAFDGINNLVDVGGGNGTAMSIVVKACSWIRAINFDLQHVIAEAPEIEGVEHVAGDMFVQVPKADAAFIMAVLHDWKDEECIQILKKCREAIPKENGRVIIVEVIIEEEGNHDKLKDTRLMLDMIMMAHTNFGKERTLKEWDHVIKMAGFSTYTVKSIKNTVNFVIMAFP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1514 369 SUPERFAMILY "Winged helix" DNA-binding domain 22 122 IPR036390 -
Lal15g1514 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 361 IPR029063 -
Lal15g1514 369 PANTHER O-METHYLTRANSFERASE 19 361 IPR016461 GO:0008168
Lal15g1514 369 Coils Coil 1 21 - -
Lal15g1514 369 Pfam O-methyltransferase domain 142 350 IPR001077 GO:0008171
Lal15g1514 369 PIRSF O-mtase 10 369 IPR016461 GO:0008168
Lal15g1514 369 MobiDBLite consensus disorder prediction 1 16 - -
Lal15g1514 369 Gene3D - 14 118 IPR036388 -
Lal15g1514 369 Gene3D Vaccinia Virus protein VP39 119 368 IPR029063 -
Lal15g1514 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 369 IPR016461 GO:0008168
Lal15g1514 369 MobiDBLite consensus disorder prediction 1 24 - -
Lal15g1514 369 Pfam Dimerisation domain 44 88 IPR012967 GO:0046983
Lal15g1514 369 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 19 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1514 Lal-Chr15 17276455 17284594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1514 45 364 Monolignol Biosynthesis Gene Families AT5G54160 36.000 4.83e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1514 K22588 - gmx:100782951 480.715