Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1513 ATGGGAGAAACACAAAGAGAGATAGTATCAGCATTGAAGAAGGAAGAAGATTCAAAAGAAGAATCACAGGCTCAATTGGATATATGGAAGTACATATTTGGGTTTGTGGAACAAGCAGTGGTGAAATGTGCCATTGAACTTGGCATAGCTGAAGCCATTGAAAGCAATGGAGGACCTATGACACTCTCTGAGATATCATCAACTCTAGGGTGTGATCCTTCCCTTCTTTACCGCATCATGAGATTCTTAACTCATAGGAATATATTCAAAGCCATACCCACCAACACAGGCACCAACAACCATGGCTATTCCTATGCACAAACACCTCTCTCTCGTCGTTTGATGAGAAATGATAAACACAGCATGGCTGCTCTTATTCTTCTTGAAAGTAGTCCTGTGATGCTAGCACCATGGCATAATCTAAGTGCTTGTGTTTCAGCTAATAGTGATTTCCCATTTGAAAATACTTATGCTCAAGACCTGTGGCAATATACTGCTGCAAATCCTGATCATAGTAATCTGTTCAATGATGCAATGGCATGCCTTGCTAATCTAACTGTGCCTGCTATTATTGAAGGTTACAGTGAGGCTTTTGATGGAATAAATAGCTTAGTAGATGTGGGTGGTGGAAATGGCACAGCCATGAGTATTGTGGTTAAGGCTTGTTCTTGGATAAGAGCAATCAACTTTGATCTTCAACATGTCATTGCTGAGGCCCCAGAGATTGAAGGAGTGGAACATGTGGCTGGTGACATGTTTGTACAAGTTCCAAAAGCTGATGCTGCTTTTATTATGGCTGTTTTGCATGATTGGAAAGATGAAGAGTGCATTCAAATCTTAAAGAAGTGTAGGGAAGCAATTCCAAAGGAAAATGGAAGAGTTATTATTGTGGAAGTAATAATTGAAGAAGAAGGGAATCATGATAAGTTAAAAGATACAAGATTGATGTTGGATATGATAATGATGGCACACACCAACTTTGGAAAAGAGAGGACACTTAAAGAATGGGATCATGTTATCAAAATGGCTGGATTCAGCACATACACTGTCAAATCCATAAAGAATACTGTGAATTTTGTTATTATGGCTTTTCCATGA 1098 0.3907 MGETQREIVSALKKEEDSKEESQAQLDIWKYIFGFVEQAVVKCAIELGIAEAIESNGGPMTLSEISSTLGCDPSLLYRIMRFLTHRNIFKAIPTNTGTNNHGYSYAQTPLSRRLMRNDKHSMAALILLESSPVMLAPWHNLSACVSANSDFPFENTYAQDLWQYTAANPDHSNLFNDAMACLANLTVPAIIEGYSEAFDGINSLVDVGGGNGTAMSIVVKACSWIRAINFDLQHVIAEAPEIEGVEHVAGDMFVQVPKADAAFIMAVLHDWKDEECIQILKKCREAIPKENGRVIIVEVIIEEEGNHDKLKDTRLMLDMIMMAHTNFGKERTLKEWDHVIKMAGFSTYTVKSIKNTVNFVIMAFP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1513 365 PANTHER O-METHYLTRANSFERASE 14 357 IPR016461 GO:0008168
Lal15g1513 365 Pfam O-methyltransferase domain 138 346 IPR001077 GO:0008171
Lal15g1513 365 Gene3D Vaccinia Virus protein VP39 115 364 IPR029063 -
Lal15g1513 365 PIRSF O-mtase 6 365 IPR016461 GO:0008168
Lal15g1513 365 Gene3D - 9 114 IPR036388 -
Lal15g1513 365 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 14 357 - -
Lal15g1513 365 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Lal15g1513 365 SUPERFAMILY "Winged helix" DNA-binding domain 18 118 IPR036390 -
Lal15g1513 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 357 IPR029063 -
Lal15g1513 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1513 Lal-Chr15 17265427 17267700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1513 1 360 Monolignol Biosynthesis Gene Families AT5G54160 34.247 3.45e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1513 K22588 - gmx:100782951 462.225