Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1507 ATGACCCTTAGAAAATCACAAGCATATGTTCTCAAGAAAATTCTCAAAAAATGCTTAAGTTTGGCAAAGAAACAAGGCTATAATGAAAAGGGTTTTCCTCCTCAAGATGTACCAAAAGGTCATTTCGCAGTTTATGTTGGAGAAAACAGAACAAGATATATCATCCCAATTTCATGGTTGCCTCATCCATGGTTTCAAAGTTTGCTCGAAAGGGTCGAAGAAGAGTTCGGCTTCAATCATGACATGGGCCTTACCATCCCATGTCATGAAGTTATTTTTGAATCCCTTATCTCATTGATCCAATAA 306 0.3725 MTLRKSQAYVLKKILKKCLSLAKKQGYNEKGFPPQDVPKGHFAVYVGENRTRYIIPISWLPHPWFQSLLERVEEEFGFNHDMGLTIPCHEVIFESLISLIQ 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1507 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 101 IPR003676 GO:0009733
Lal15g1507 101 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 4 101 - -
Lal15g1507 101 Pfam Auxin responsive protein 31 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1507 Lal-Chr15 17201197 17201502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1507 4 101 Calmodulin-binding Proteins AT3G43120 42.157 3.11e-21 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0072 4 423699 424016 Lal15g1507 15 17201197 17201502 ECH
Lal21g0118 21 811081 811404 Lal15g1507 15 17201197 17201502 ECH
Lal8g0543 8 3709224 3709541 Lal15g1507 15 17201197 17201502 ECH
Lal10g0878 10 16311661 16311981 Lal15g1507 15 17201197 17201502 ECH
Lal15g1507 15 17201197 17201502 Lal15g1507 15 17201197 17201502 ECH
Lal1g0186 1 1124795 1125115 Lal15g1507 15 17201197 17201502 ECH
Lal2g0108 2 667944 668264 Lal15g1507 15 17201197 17201502 ECH
Lal15g1507 15 17201197 17201502 Lal23g1461 23 14967820 14969256 LSH