Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1505 ATGACCGGAACGGCGAAGATAGATTCCGATCGGAAGAGGAAGAAAGCGTCGATTTATACGGCGGAGAAGGAGATTCCAAAGGATAAGAAGACGAAGATGTCATCATCGAACAGACATGGTAGTAGTGGTGTTGAAGTTAGGGCATCTCACATATTAATCAAACACGAAGGTTCTAGAAGGAAAGCTTCGTGGAAGGATCCAGAAGGACGCGTTATCAAGAATACTACTAGAGAAAGCGCTGTTTCTCAGATCAAGTTACTACGAGACGACATCGTTTCTGGAAAGGTTCAATTCGAGGATGTTGCGGCTCGCTACTCCGATTGCAGCTCAGCCAAACGCGGTGGCGATCTAGGTCCTTTTGGTCGTGGGCAGATGCAGAAGCCTTTTGAAGAAGCAACGTTTGCTCTTAAAGTTGGTGAAATTAGTGATATAGTGGATACTGATAGTGGAGTCCACATAATTAAGAGAACAAAGTGA 477 0.4486 MTGTAKIDSDRKRKKASIYTAEKEIPKDKKTKMSSSNRHGSSGVEVRASHILIKHEGSRRKASWKDPEGRVIKNTTRESAVSQIKLLRDDIVSGKVQFEDVAARYSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRTK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1505 158 MobiDBLite consensus disorder prediction 1 35 - -
Lal15g1505 158 Pfam PPIC-type PPIASE domain 50 157 IPR000297 GO:0003755
Lal15g1505 158 Gene3D - 41 158 IPR046357 GO:0003755
Lal15g1505 158 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 157 - -
Lal15g1505 158 SUPERFAMILY FKBP-like 45 157 - -
Lal15g1505 158 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 157 - -
Lal15g1505 158 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 98 118 IPR023058 -
Lal15g1505 158 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 43 158 IPR000297 GO:0003755
Lal15g1505 158 MobiDBLite consensus disorder prediction 1 71 - -
Lal15g1505 158 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1505 Lal-Chr15 17178408 17181480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1505 100 155 Sulfurtransferasese or Rhodanese AT5G19370 43.103 2.72e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1505 K09578 - gmx:100500451 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1505 15 17178408 17181480 Lal15g1505 15 17178408 17181480 ECH
Lal15g1505 15 17178408 17181480 Lal16g1834 16 17450293 17451978 LSH