Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1479 ATGTACACATATACACATTTTCTTGTTGTAGTGTTGGCTGAGAAAATCTTCATTTGTTCCATATTCCAAGTGAAAATGGTTAGAAAATGTTCACATTGTGGAAACATAGGCCACAATTCAAGGACTTGTACATCTTTCAAAGGCACTTCCTTTGTAGGGCTTCGCCTTTTTGGTGTGCAACTAGATATATCATCATCATCATCGTTATCTTCATCATCATCATCTTCTGTTACAATCAAGAAAAGCTTTAGCATGAACTCTTTCTCCTTGCCCTCACCATATTCTTCATCAAAAATAATAACCATTGATGAATATTCTGATAAAACATTTGTTGGGTATCTATCAGATGGTCTCATAGGTCCAACCCAAGAGAGGAAGAAAGGAGTTCCATGGACAGAAGAGGAGCATAGAGCATTCATTTTTGGACTTGAAAAGTTAGGAAAAGGTGATTGGAGAGGTATCTCTAGAAACTATGTCCCTACCAAAACTCCAACTCAAGTTGCAAGCCATGCTCAAAAGTACTTTCTTCGATTAACAACATTAAATAACAAAAAGCGACGTTCAAGTCTCTTTGACAAGGTTGGTAGCAACAACACCAAGATAGAAGGTGAAGCTAATACCATTTATAATTGCAAACAAGAATGTGAACATAAGCAAGAAATTTGTGATAATTATTCTCAACTTCAACCAGCTTCAGAACATGAAAGTGTACCAATCTGGTTACAACCCCAGATGAATAATTCTTCAAATGTTGCAATGCCAGATCTAGAACTCACTCTTGCAGCCCCTAAGGTTAAGGCTAAGACCCTAGAACAAAATAAATCATCTCCTACTCCATTTATGTTTGGGCCAATTAGAGTGACTTAG 867 0.3691 MYTYTHFLVVVLAEKIFICSIFQVKMVRKCSHCGNIGHNSRTCTSFKGTSFVGLRLFGVQLDISSSSSLSSSSSSSVTIKKSFSMNSFSLPSPYSSSKIITIDEYSDKTFVGYLSDGLIGPTQERKKGVPWTEEEHRAFIFGLEKLGKGDWRGISRNYVPTKTPTQVASHAQKYFLRLTTLNNKKRRSSLFDKVGSNNTKIEGEANTIYNCKQECEHKQEICDNYSQLQPASEHESVPIWLQPQMNNSSNVAMPDLELTLAAPKVKAKTLEQNKSSPTPFMFGPIRVT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1479 288 Pfam Myb-like DNA-binding domain 130 175 IPR001005 -
Lal15g1479 288 Gene3D - 129 182 - -
Lal15g1479 288 ProSiteProfiles Myb-like domain profile. 123 175 IPR001005 -
Lal15g1479 288 CDD SANT 130 175 IPR001005 -
Lal15g1479 288 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 126 177 IPR006447 GO:0003677
Lal15g1479 288 ProSiteProfiles Zinc finger CCHC-type profile. 28 45 IPR001878 GO:0003676|GO:0008270
Lal15g1479 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 179 IPR017930 -
Lal15g1479 288 PANTHER TRANSCRIPTION FACTOR KUA1 26 226 - -
Lal15g1479 288 SUPERFAMILY Homeodomain-like 124 179 IPR009057 -
Lal15g1479 288 SMART sant 127 177 IPR001005 -
Lal15g1479 288 ProSiteProfiles SANT domain profile. 131 179 IPR017884 -
Lal15g1479 288 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 26 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1479 Lal-Chr15 16966359 16968581 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal15g1479 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1479 - - jre:109009824 275.404