LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal15g1467	ATGTCAAGAATAATTCAAGAGAAGAAATTAGGTGCAGGAAGAGTTGTTGCTGTTGCAATTGAAAACAACAAAACAAGCCAATATGCTGCAAAATGGGCTGTGGATAATTTACTTCCAAAAGATCAAACTTTGTTACTAATTCATGTTAAACAGAAAGCTTCATCAATTGCTACACCATCTGGAACCCTTATAGCTCTTGATGCTAATGACGATGTCGCGAGAGCATACAAGCAACAAATGTACAACGAATCGAGGGAGCTTTTCGCTTCATTCCGCGTATTCTGCAATAGAAAGAGTATACAATGCCAAGAGATATTGTTAGAGGACACAGATATACCTAAGGCATTAATAGAAGGTATTAACACATATTCCATTGAGCTTCTAGTACTTGGTGCAGCATCAAGAAGTGGTCTTGTAAGAAAATTTAGAACAACAGATGTACCAAATCAAGTGTCAAAAGGGGTGCCACCATTCTGCACTTTGTATATTATTTCCAAAGGAAAAATATCATCTGTGAAATCTGCAACTGCTCCATTAACTACTAAACCTACGATCAGTAGCAATGCATCGGAGCAGCAGTATCAGCTTGCCCCTAGTCCTGACAGAATGGATACACAACTGATGCGCAACCATCAACCACGCCAATCAATAGAGAGACCAACATATGGTGCACCCCGGCCATCCCTCGAAGACGGCGGAATCAAATCACCATTCACAAGATCTGGTAGATCGTATCAAAGATCAAACGAATCCTCGATATCGGATTGTGACATATCATTTGTGAGCAGTGGAAGGCCAAGTGTTGATAGAATGTTCCCTTCATTGTATGATGAAATGGACTTTTCAAGGCTTTCAACAGGCTCAGATTATGATGCTAGAAGCTCTAGTTCATCTTACTCAGGTGCTAAGTCAATTGATCAGGGTGACTATTCATTTTGTTCACAAGATAGTGGGATTTCAATGTCATCATTACGGTTATCAAATTCGGAAGATGTGGAAGCTGAAATGTGGAGACTGAAGTTAGAACTGAGGCAAACAATGGACATGTATAGTACAGCTTGCAAGGAAGCTCTAACAGCGAAGCAAAAGGCGATGGAACTTCAACGTTGGAAATTGGAAGAACAAAGGAAAGTGGAAGAGTTTCGTATGGCTGAAGAGGCAGCATTGGCAGTAGCTGAGAAGGAGAAAGCAAGAGCTAAAGCTGCAATGGAGGCAGCAGAAGCAAATAAGAAAATTGCAGAGTTTCAAGCACAACAAAGAATGAACTCGGAATCTGACCAGAAGAAGAAAACAGAAGATACTATTTCACAAGGTCATGCAAGGTATAGAAAATATTGTATTGAGGAGATTGAAAATGCAACAAACAACTTTGCCCCTTCTCTCAAGATTGGTGAAGGAGGTTATGGACCAGTGTATAGGTGTGAACTAGACCATACACCAGTTGCAATTAAAGTGCTAAAGCCGGATGCATCTCAAGGACGGTCACAATTTCAGCAAGAGGTTGAAGTGCTAAGTTGCATGAGACACCCGAACATGGTTCTCCTCCTCGGAGCATGTCCGGAGTACGGTTGCCTAGTGTATGAGTACATGGCAAATGGAAGCTTGGATGATTGCCTCTTTAGGAGAGGTAAGTCACCAGCTCTTCCTTGGCAGCTAAGATTCAGAATTGCTGCAGAAATTGCCACTGGCCTCAATTTCCTCCACCAGGCAAAGCCAAAACCACTGGTGCACCGTGACTTAAAACCTGGAAACATCTTGCTTGACCGCAACTTCGTGAGCAAGATTAGTGATGTTGGATTGGCAAGGCTTGTCCCTCCTACAGTCGCGGACACTGTAACGCAATATCGAATGACATCAACAGCAGGAACATTCTGCTACATTGATCCTGAGTACCAGCAAACAGGCATGTTGGGAATCAAATCTGATGTATACTCACTTGGGATCATGCTGCTACAGATCATAACAGCCAAGCCACCAATGGGGTTAACTCATCAGGTTGGAAGATCTATTGAGGATGGTACTTTTCATGAGATACTTGACCCTGCAATTGAGGATTGGCCACTTGAACATGCTATGCATTTTGCTAAGCTCGCGTTGCAGTGTGCGGAAATGCGAAAAAAAGATAGACCTGATCTTGGGAAAGTTTTATTGCCTGAGCTCAATAAGCTTAGAGATTTTGCTGAAGAAAACTTGCCTATGATGATGATGTTTGGTGCAGGATTCGCTCCCAGAAATAACAACACTTACTCAAACTCCGCATTTTCCTCATCCACATTTCAGGATACTATGAGTGAATCTCAAATGTCTGGAATGTCTGGTTATGAAAGTCGTTCAAGTTCATCCACATTGAGTAATAGTAATAGTTTTGTTGCAACAAAGATGATTTGA	2388	0.4183	MSRIIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQTLLLIHVKQKASSIATPSGTLIALDANDDVARAYKQQMYNESRELFASFRVFCNRKSIQCQEILLEDTDIPKALIEGINTYSIELLVLGAASRSGLVRKFRTTDVPNQVSKGVPPFCTLYIISKGKISSVKSATAPLTTKPTISSNASEQQYQLAPSPDRMDTQLMRNHQPRQSIERPTYGAPRPSLEDGGIKSPFTRSGRSYQRSNESSISDCDISFVSSGRPSVDRMFPSLYDEMDFSRLSTGSDYDARSSSSSYSGAKSIDQGDYSFCSQDSGISMSSLRLSNSEDVEAEMWRLKLELRQTMDMYSTACKEALTAKQKAMELQRWKLEEQRKVEEFRMAEEAALAVAEKEKARAKAAMEAAEANKKIAEFQAQQRMNSESDQKKKTEDTISQGHARYRKYCIEEIENATNNFAPSLKIGEGGYGPVYRCELDHTPVAIKVLKPDASQGRSQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKSPALPWQLRFRIAAEIATGLNFLHQAKPKPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHQVGRSIEDGTFHEILDPAIEDWPLEHAMHFAKLALQCAEMRKKDRPDLGKVLLPELNKLRDFAEENLPMMMMFGAGFAPRNNNTYSNSAFSSSTFQDTMSESQMSGMSGYESRSSSSTLSNSNSFVATKMI	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal15g1467	795	PANTHER	OS02G0152300 PROTEIN	1	784	-	-
	Lal15g1467	795	MobiDBLite	consensus disorder prediction	765	795	-	-
	Lal15g1467	795	Coils	Coil	382	418	-	-
	Lal15g1467	795	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE	1	784	-	-
	Lal15g1467	795	Coils	Coil	355	375	-	-
	Lal15g1467	795	ProSiteProfiles	Protein kinase domain profile.	457	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal15g1467	795	MobiDBLite	consensus disorder prediction	180	199	-	-
	Lal15g1467	795	Gene3D	Phosphorylase Kinase; domain 1	436	529	-	-
	Lal15g1467	795	Gene3D	HUPs	14	157	IPR014729	-
	Lal15g1467	795	CDD	STK_N	15	167	-	-
	Lal15g1467	795	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	575	587	IPR008271	GO:0004672\|GO:0006468
	Lal15g1467	795	Gene3D	Transferase(Phosphotransferase) domain 1	530	733	-	-
	Lal15g1467	795	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	142	-	-
	Lal15g1467	795	Pfam	Protein kinase domain	462	712	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal15g1467	795	SUPERFAMILY	Protein kinase-like (PK-like)	437	716	IPR011009	-
	Lal15g1467	795	SMART	serkin_6	457	727	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal15g1467	795	Pfam	Universal stress protein family	14	153	IPR006016	-
	Lal15g1467	795	MobiDBLite	consensus disorder prediction	212	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal15g1467	Lal-Chr15	16869088	16873330	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal15g1467	16	768	Receptor kinase-like Gene Family	AT5G35380	53.614	0.0	749

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Lal15g1467		Pkinase	2.2e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal15g1467	-		-	gmx:100803837	1124