Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1451 ATGATGCAAGAAAGAAGAAACTCAGAACTTGAACTTGGTTCTTGTTTATCAAATCTCATATTATCTAGCAACACAAACACCTTAGACACAATTTTCTCTCACTATCCACAACCAGATTCCACTGCTATGTTGCATCATCCATTAGGGTCTTCAGTGTATCTAAACCAAATAGATATGCTACAAAGTTTCTACAAAGAAAGTTTACAAAATGGGTCATTCATTTCCTCTACTAACACCACTTCTTCAATAAGCACTTGGAAGAAAAAAGTGTACCGTGGAGTGAGGCAAAGGCAACGTGGAAAATGGGTATCAGAGATTAGACTTCCTCAGAATAGAAAAAGGGTTTGGCTTGGAACTTATGATAGTCCTGAACCTGCAGCTTTTGCTTATGATCGTGCAGCTTATAAGCTAAGAGGTGAATATGCACGTTTAAATTTCCCTAACCTTAATGATTCTAAAGTAATATGTAACCTATTAGGATTTGAAGATTCAATGAAATTGAATGCTTTGAAAAGTTCAGTGGATGCTAAAATAAAAGCTATATGGCATAAGGAGAAAAGGGAAAAATCTAAGAAGAAAAGTGATACAAAGAAGCTTGGTTGTTGTGATAGTGAGAAAAAAACACAGAAGAGAGAATCTATGTCATTGTCTAGTTCTTCATCTTCTTCTTTAATGTTGTCGGAATCAAGTTTTTGTGATGGTTTAAGAAATGAGTTTGTTTCACCAAGTGTTTCAAATGAGTGTTCAATAATGGTGGATGAGGAATTGGGTATGGAAGATTTTTGTTCATTGGCAAGAATGCCTTCCTTTGATCCTGAGTTGATTTGGGAACTTCTTGGAAATTAG 846 0.3534 MMQERRNSELELGSCLSNLILSSNTNTLDTIFSHYPQPDSTAMLHHPLGSSVYLNQIDMLQSFYKESLQNGSFISSTNTTSSISTWKKKVYRGVRQRQRGKWVSEIRLPQNRKRVWLGTYDSPEPAAFAYDRAAYKLRGEYARLNFPNLNDSKVICNLLGFEDSMKLNALKSSVDAKIKAIWHKEKREKSKKKSDTKKLGCCDSEKKTQKRESMSLSSSSSSSLMLSESSFCDGLRNEFVSPSVSNECSIMVDEELGMEDFCSLARMPSFDPELIWELLGN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1451 281 MobiDBLite consensus disorder prediction 189 221 - -
Lal15g1451 281 Pfam AP2 domain 90 140 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 PRINTS Ethylene responsive element binding protein signature 129 149 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 11 279 - -
Lal15g1451 281 SMART rav1_2 90 153 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 Gene3D AP2/ERF domain 90 148 IPR036955 GO:0003700|GO:0006355
Lal15g1451 281 MobiDBLite consensus disorder prediction 189 212 - -
Lal15g1451 281 ProSiteProfiles AP2/ERF domain profile. 90 147 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 11 279 - -
Lal15g1451 281 CDD AP2 91 149 IPR001471 GO:0003700|GO:0006355
Lal15g1451 281 SUPERFAMILY DNA-binding domain 90 148 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1451 Lal-Chr15 16713191 16714036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1451 11 281 AP2-EREBP Transcription Factor Family AT1G64380 42.202 7.30e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal15g1451 AP2 8.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1451 - - lang:109332433 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1451 15 16713191 16714036 Lal15g1451 15 16713191 16714036 ECH