Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1440 ATGAATTTCCTTTCCATTTATGTGTTGTGTTTGGTTTTTTGGAAAGGAAATGGTGAACCTGTTGAAGATAAAGAAAATTTGCTTGATTTTGTGAAAAAGTTTCCACCTTTAAGGCCATTGAATTGGAATGAGAATTTTTCAGTGTGTGATAATTGGATTGGTGTAACTTGCAATGAAAACAATTCAAAAATCATAGCTATTAGATTACCAGGTTTTGGATTTCATGGCACTATTCCACCAAACACTATTAGCAAAATCACTTCACTTCAAATTTTGAGTCTTAGATCCAATTTTATAAGTGGAAATTTCCCTATTGATTTTTCCAATCTTAGGAACTTGTCTTTTCTTTATCTTCAGTTCAATAATTTGTCTGGTCCTTTACCTGATTTTTCAGTTTGGAAGAATCTTAGTGTTGTTAATTTGTCTAGTAATGATTTCAATTGTAGTTTGCCTGTTTCACTTTCGAATTTGACTCGGCTTTCGAGTTTGAATCTTGCGAATAATTCGCTTTCTGGTGAAATTCCTGATCTTATGTTGCCTAGGTTGCAACTGCTTAACTTGTCTAACAACAATTTACATGGTGTTGTGCCGAATTCGCTGAAGAGGTTTCCTGAGTCAGCATTCTATGGAAATAACATTTCTCTTATAGTTGGAAATTCTGCAGCTGCTTCGCCCGTGCATCCACCGCTGGCTTATGAGCCAAATTTGAAGCCTAGGAAACATGAAAGGCTCGGCGAAATGGCGCTGATTGGAATTATTATCGCCGGTGGTGTTATTAGCCTTGTAGGGTTTATATTTTTTATGTTTGTGTGCTGCTCAAGAATTAGAAGGGATGAAGATGATGACGCCTTCGGTAGGGAATTGCAAAAGGGAAGAATGTCTCCCGAAAAAGCGGTTTCGAGGAAGCAGGATGCAAGTAATAAACTGACCTTCTTCGAAGGATGTAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGTTAGGGAAGGGAACATTTGGTACGGCATACAAGGCGGTACTAGAGGATGCAAACACAGTTGTTGTGAAGAGGTTAAAGGATGTAGCTGTTGGAAAGAAGGATTTTGAGCAACACATGGAGATTGTAGGAAATCTTAAACATGAGAATGTGGTTGAATTGAAGGCATATTATTATTCTAAAGATGAGAAACTCATGGTGTATGATTACTATAGTGAAGGGAGTATCTCTTTTATGTTGCATGGTAGAAGAGGCGAGGATAGGGTGAATTTAGATTGGGATACTCGGCTGAGAATAGCTCTGGGTGCTGCAAGAGGCATTGCGCGAATCCATGTCGAGAATGGTGGTAAGCTTGTACATGGCAACATAAAATCCTCAAATATCTTTCTCAACACTAAACAATACGGATCTGTATCTGACCTCTGCCTTGCAACAATAATGAGCTCGCTCGCCCCACCAATTTCTCGAGCTGCTGGTTACCGTGCGCCTGAAGTTATTGACACAAGAAAAACAGGACAAGCTTCCGATGTTTACAGCTTCGGCGTTGTATTACTAGAGCTTCTAACTAGGAAATCCCCGATCCACACAACCGTTGGTGACGAGATTATCCATCTAGTAAGGTGGGTTCATTCAGTTGTAAGAGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAACTAATGAGATATCCAAACATAGAGGAAGAGATGGTGGAAATGTTACAGATAGCAATGTCATGTGTTGTAAGGATGCCTGATCAGAGACCGAAGATGTTCGATGTAGTGAAGATGATAGAAAATGTTAGGCAGATTGATGCAGTGACTTAG 1815 0.3961 MNFLSIYVLCLVFWKGNGEPVEDKENLLDFVKKFPPLRPLNWNENFSVCDNWIGVTCNENNSKIIAIRLPGFGFHGTIPPNTISKITSLQILSLRSNFISGNFPIDFSNLRNLSFLYLQFNNLSGPLPDFSVWKNLSVVNLSSNDFNCSLPVSLSNLTRLSSLNLANNSLSGEIPDLMLPRLQLLNLSNNNLHGVVPNSLKRFPESAFYGNNISLIVGNSAAASPVHPPLAYEPNLKPRKHERLGEMALIGIIIAGGVISLVGFIFFMFVCCSRIRRDEDDDAFGRELQKGRMSPEKAVSRKQDASNKLTFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAVLEDANTVVVKRLKDVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSEGSISFMLHGRRGEDRVNLDWDTRLRIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGSVSDLCLATIMSSLAPPISRAAGYRAPEVIDTRKTGQASDVYSFGVVLLELLTRKSPIHTTVGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMFDVVKMIENVRQIDAVT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1440 604 Pfam Protein kinase domain 329 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1440 604 Gene3D Ribonuclease Inhibitor 133 220 IPR032675 -
Lal15g1440 604 PANTHER OS05G0588300 PROTEIN 15 600 - -
Lal15g1440 604 Gene3D Ribonuclease Inhibitor 23 132 IPR032675 -
Lal15g1440 604 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Lal15g1440 604 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1440 604 PANTHER PROTEIN, PUTATIVE-RELATED 15 600 - -
Lal15g1440 604 Gene3D Transferase(Phosphotransferase) domain 1 402 603 - -
Lal15g1440 604 SUPERFAMILY Protein kinase-like (PK-like) 330 594 IPR011009 -
Lal15g1440 604 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Lal15g1440 604 SUPERFAMILY L domain-like 34 203 - -
Lal15g1440 604 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1440 Lal-Chr15 16588792 16591881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1440 12 597 Receptor kinase-like Gene Family AT4G23740 65.093 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal15g1440 Pkinase 4.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1440 - - lang:109349930 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1440 15 16588792 16591881 Lal15g1440 15 16588792 16591881 ECH
Lal16g1170 16 8011135 8015876 Lal15g1440 15 16588792 16591881 LSH
Lal15g1440 15 16588792 16591881 Lal23g0422 23 6890408 6894685 LSH