Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal15g1429 | ATGAACGACTCAGATGTATCGAAGCAAATTGATCAGATGGTGAGGTTTATCCATCAGGAAGCAGAAGAAAAAGCTAACGAGATTTCTGTCTCCGCCGAAGAAGAATTCAACATTGAGAAGCTTCAATTGCTGGAAGCCGAGAAGAAGAAGATTAAGCAGGAGTATGAGCGCAAAGAGAAACAAGTTGAAATTCGCAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATAAAAGTTCTTCAAGCTCAAGATGAAGTTGTTAATTCCATGAAAGATGCCACAGCAAAGGAACTTTTGACTGTGAGCGATCATCATTATTTCGATTTTACCCATCATGATCATGTGTACAGGAACCTTATCAAAGATCTCATTGTTCAGAGCTTGCTAAGGCTGAAAGAACCTTCTGTCTTATTAAGATGTCGGGAAAATGACCTGCACTTGGTAAAGCATGTGCTGGATTCAGCTGCAGAGGAGTATGCTGGTAAAGCAAATGTAGATGCACCAGAGATCATTGTTGACGAAAATGTTTTTCTTCCACCTGCACCCAGCAATGACAATGTCCATGAACTCCACTGTTGTAACATTTTGTTCATCTCTGGTGGGGTGGTGCTGGCTTCTCGAGATGGAAAGATTGTGTTTGAAAATACTCTTGATGCACGACTGGATGTATTGTTCCGTAGCAAGCTTCCAGAGATCCGTAAGCAGCTCTTCGGACAAGTTGCTGCTTGA | 735 | 0.4204 | MNDSDVSKQIDQMVRFIHQEAEEKANEISVSAEEEFNIEKLQLLEAEKKKIKQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDEVVNSMKDATAKELLTVSDHHYFDFTHHDHVYRNLIKDLIVQSLLRLKEPSVLLRCRENDLHLVKHVLDSAAEEYAGKANVDAPEIIVDENVFLPPAPSNDNVHELHCCNILFISGGVVLASRDGKIVFENTLDARLDVLFRSKLPEIRKQLFGQVAA | 244 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal15g1429 | 244 | SUPERFAMILY | V-type ATPase subunit E-like | 87 | 240 | - | - | |
| Lal15g1429 | 244 | PANTHER | ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E | 1 | 244 | - | - | |
| Lal15g1429 | 244 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 239 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Lal15g1429 | 244 | Coils | Coil | 34 | 61 | - | - | |
| Lal15g1429 | 244 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 240 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Lal15g1429 | 244 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 244 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Lal15g1429 | 244 | Gene3D | - | 94 | 243 | IPR038495 | - | |
| Lal15g1429 | 244 | Gene3D | - | 1 | 62 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal15g1429 | Lal-Chr15 | 16417328 | 16426397 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal15g1429 | 1 | 244 | Primary Pumps ATPases(2) | AT4G11150 | 72.541 | 9.24e-122 | 344 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal15g1429 | 15 | 16417328 | 16426397 | Lal15g1429 | 15 | 16417328 | 16426397 | ECH | |
| Lal16g1171 | 16 | 8022469 | 8025617 | Lal15g1429 | 15 | 16417328 | 16426397 | LSH | |
| Lal15g1429 | 15 | 16417328 | 16426397 | Lal23g0421 | 23 | 6851877 | 6854791 | LSH |