Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1404 ATGATCTCAAATAGGTCATCCTTAGATTGCCTTGGACTTGAAGCTGATGGTAAAAACAATGATAATCTTGTAAAAGATCATGTTGGTAATGCTGAAAGTGACAATGTTAAACAAAAAAACTTGTTTTATCAGCTTATAAAGGTTTACCAAGAGGTGAATTCCCCCGGAGGAATTGTTCGGCCTTTGCCGGTTTTGCTTGGGGATGGTCAATTACTGGATTTGTATAAACTGTTTTCCCTTGTGAAGGAAAGAGGTGGGTATGCCGCAGTGTCGAGAAAAGGGTCGTGGAGCTTTGTGACCAAGGAATTAGGTTTGGACCTTCAAGTTTTGGCTTCAGTGAAACTTGCTTATGATAAGTATCTGAATGATTTTGAAGCATGGGTCAAGAAGACTTTTGAAGAGAAAATTATCAGAAATAGGAATCATGGATATGGTTGGAGTTTTAAGCCGTTTCCATTGGAGATAGAGAAAGAGTTGAGTGCCCTATTGTGTCTTGATCTAAAGGAGAAAGACGATGAACTTGATATAAAGGAGAAAGACGATGAACTCGACATAAAGGAGAAAGACGACGAACTTGATATAAAGGAGAAAGACGATGAACTCGATATAAAGGAGAAAGACGATGAACTCGATATAAAGGAGGGCGACAATGAACTTGAGTTAAAATCAAAGAAAAATAGAAGGTTCATTGATTTGTTGGTTAACCACAAGAATGAGACTAAATTGTTGGACACCAATAATCAAAATAACATATGTGAGGATGTCCAAAATGTCCATGTTGTTGGAGTCGAAAAATTATGCAGCGGTGATAAGTATGATCTTGCTACCTTGCATAAGGAAGACGTTGAGAAGGAATATAATAATCGCAAGCGCAAGCGGGTATCATTGTCTGGAATGCTAAACTGGATGAAGCATATTGCAAAGCATCCTCTGGTTCCTGTAACTCCACCTTTACCAAAACCATCGAAGTGGAAGGGATATAAAGGTGATGACTTTTTTTCCCTGTTACTAAGGGCAAGAGAGGTTCTATTGTTGAAACAGTGTGTAGAACCAAATGGTGGACCCACTTCTTTGCAGAATCAGAAGATGCATCCTTCCATGTACGAGGATGAAGTTGCTCGTGATCACCATTCTACAGCGAGGTTGAAATGTAGTGGAAGGCAGGCTACCTCTGTTAAGTCTCGCTTGTGCTCTTGTTGCAATTCGCGTTCTGCCGATGAAAATAGATTGACTAGTTCTGTCAACAAGGAGGCAGAAAAATGCCCCCCAAAGAAAATTGCAAAAGTAGATTTGTTGACTGCGAAGATAATGGCGAAAAAGTCTGGTGATAAGGTTTTCGAAAAAGGGAATGTTTCTATTGGTCCTCGTTACCAAGCAGAAGTCCCGGAATGGACTGGTGTAGTTTCTGAGAGCGACTCTAAATGGGATGGCACACAAGTATGGCCTCCGCCGGAACAGGACTCAGAAGCTGCTACTAAAACAGACCTTATTGGGAGAGAAAGAGAATATAAGTGTAGCTGCGAAGTTATAGGTTCTGTTCAGTGTCATCGATTTCATATTGCTGAAAATAGGATGAAATTGAAGCTTGAATTGGGACCTTTATTTTACCATTGGGGATTTGATCGAATGGGTGAGGAAGTTTCGCTTCAATGGACAACAGTAGAAGAAAAGAAATTTAAGGAATTGTTGAGATTACATGCTCCCATTTGGAACAACACATCCATATACTTTCCGAAGAAGAAAAGAAGAAACTTGGTGAACTATTACTTCAATGACTTTGTTATCCAACTAAGAAGCTATCAGAATCGCGTGACTCCGAATAGTGTTGACAGTGATGATGATGAAGCAGAATTTGGATCTTTTGGTCATGGTTTTGGGATGGAAACTCTCATGGTCGATGACGTTTTGCCCGAGTGTTCCATGAATAAGCAGTGCACTGATTTCGAGTACTAG 1953 0.4009 MISNRSSLDCLGLEADGKNNDNLVKDHVGNAESDNVKQKNLFYQLIKVYQEVNSPGGIVRPLPVLLGDGQLLDLYKLFSLVKERGGYAAVSRKGSWSFVTKELGLDLQVLASVKLAYDKYLNDFEAWVKKTFEEKIIRNRNHGYGWSFKPFPLEIEKELSALLCLDLKEKDDELDIKEKDDELDIKEKDDELDIKEKDDELDIKEKDDELDIKEGDNELELKSKKNRRFIDLLVNHKNETKLLDTNNQNNICEDVQNVHVVGVEKLCSGDKYDLATLHKEDVEKEYNNRKRKRVSLSGMLNWMKHIAKHPLVPVTPPLPKPSKWKGYKGDDFFSLLLRAREVLLLKQCVEPNGGPTSLQNQKMHPSMYEDEVARDHHSTARLKCSGRQATSVKSRLCSCCNSRSADENRLTSSVNKEAEKCPPKKIAKVDLLTAKIMAKKSGDKVFEKGNVSIGPRYQAEVPEWTGVVSESDSKWDGTQVWPPPEQDSEAATKTDLIGREREYKCSCEVIGSVQCHRFHIAENRMKLKLELGPLFYHWGFDRMGEEVSLQWTTVEEKKFKELLRLHAPIWNNTSIYFPKKKRRNLVNYYFNDFVIQLRSYQNRVTPNSVDSDDDEAEFGSFGHGFGMETLMVDDVLPECSMNKQCTDFEY 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1404 650 MobiDBLite consensus disorder prediction 473 492 - -
Lal15g1404 650 SMART ARID_2 33 125 - -
Lal15g1404 650 ProSiteProfiles ELM2 domain profile. 449 495 IPR000949 -
Lal15g1404 650 ProSiteProfiles ARID domain profile. 35 129 IPR001606 GO:0003677
Lal15g1404 650 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 2 649 - -
Lal15g1404 650 Pfam ARID/BRIGHT DNA binding domain 40 125 IPR001606 GO:0003677
Lal15g1404 650 Gene3D - 24 140 IPR036431 GO:0003677
Lal15g1404 650 SMART bright_3 37 130 IPR001606 GO:0003677
Lal15g1404 650 CDD ARID 75 125 - -
Lal15g1404 650 SMART ELM2_2 451 507 IPR000949 -
Lal15g1404 650 SUPERFAMILY ARID-like 36 129 IPR036431 GO:0003677
Lal15g1404 650 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 2 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1404 Lal-Chr15 16187302 16193608 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lal15g1404 ARID 7.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1404 - - lang:109333235 1082.78