Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1393 ATGCCATCATGGTGGGGAAAGTCTTCGTCGAAGAGGACGACAAATAAGGAAAGTATTTTTGATACAATACAGAGGAAATTTAGAAATGCTGCCGAAGATAGTTGCAACGGTAAATCGGGAGGGACTAAAAGATATCATGGAAAGTCGCCCTCAGGAAAGGGATGTAGATCAACGGTACCTTCGAGATCGACATCACCATTAGTGCATGTCTCCCGATCGAAAAGTTTGGAACAAAGGTCTAATCATTCTCAATTACTCCCATTGCCGGACTTGAACCGTGCTACTATCAATGATGGCAATCATGGAATTTGTAAAACATCAGAATTGCAAAGAGATAGAAGCACTAAACCATCTCAAAAATTTCCTATAGCTGAAACTCTCTATGCATCTTTAAAGAGGGATTCTAATGATACAGAAAGAGATATTGTCACTACATATGTCTCTAGTGATAACTCTCTTAATACAGGCGACTCGTCCGATTCGCATCTCTTTAGTCATTCGGCATCGGATTGCGAAAATGGAAGTAAAGCTAATACTAATAGTTCCTATAGAATGGTTCAAAAGGATCAATCACATATTACAGTCCAAGAAACATCAAAAGCAGCACCTCAAGTATGCAATAGTAAGCATTTGCATACCTCAACAAAAGGGAGTCCTTTGTATCCGCAAGATCGACAAATAAAGAGCGATACAAAAGGTCTACCTAGTGCGCTAAATAGTTCGAGGTCGTTTTCTTCTATAAGTTCAATGAGATCATTTGGTCCTGATCAAGTGTTAAACTTGAGATTATCGACAGGAAACCCTTCTCCGGATATAGCATCTGGTCACTGCTCTAGTTCGAGCTCAGGCCATAATTCTAGTCATAATTTTGTTAGCGGCGAAACATCGAGACAAATATTTTGGCAACAGAACAAATGCAGCCCTGAGTGTTCCCCCAAACCTAGTCAGAAAATGAGAAGCCCTAGTCCTAGTTCAAAGATACATTGTGCTTCTAGCACGCCTATGCGTCAACGTGCTAGAAATGCTATAGAAGAATCGGCTGCGAGACATCATGACGATGCTAAACAAGAAACTCATCGATTACCACTTCCTCTTATTACAATTACTAGTCCATCTCCATTTTCTCCGACCTATTCCGTGTCTTCTACTCCTTCAGCTCATCGTAGTCCTGTTCGACGACAAAATCCAACAAGCCCTGGTTCACATTGGAAAAAAGGAAAGTTGCTTGGAAGAGGAACATTTGGACATGTATTTCTTGGTTTTAACAGTCAAAGTGGCGAGTTGTGCGCAATGAAAGAGGTACCTATTTTTTACGACGATCCTAAGTCAATGGAAAGTGTTCAACAACTTGAACAAGAAATTGCACTGCTAAGTCGTTTTCGACATCCAAACATAGTCCAATATTATGGATCTGAGATGGTAGATGACAGGCTTTATATATACTTGGAGTATGTCTCTGGTGGATCAATCTATAAGCTGCTTCAGCAATATGGCGAATTTAGCGAAATTGTCGTTCGCAATTATACTCGGCAAATTCTATTTGGACTCGCATATTTGCATGCTAAAAACACAGTTCATCGGGACATTAAGGGAGCTAACATATTGGTGGATCCTAATGGATGGATAAAATTGGCAGATTTTGGTATAGCAAAACATATCAGTGGCCATTCTTCTCCATTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCAGAGGTTATAAAAAACACAATTGGTTGTAATCTTGCTGTTGATATTTGGAGTCTTGGTTGCACTGTTTTGGAGATGGCTACAACAAAACCACCTTGGAGTGACTATGAAGGGGTTGCTGCTATGTTTAAGATTGGGATTAGCAAAGATAATCCAACAATTCCTGATCATTTATCAGAAGATGGAAAAGATTTTGTGAGGCTTTGTTTGCAAAGAAATCCACAAAATCGTCCTTCAGCTGCTCAACTTCTAGAACACCCTTTTGTTAACAATGTTACTCCAGAAAGACCAATTCTGACAAATGATCCTTCAGATGCACAAGCTGCTATTATAAATGCAGCCATTGGACCTACAAAACATAGTTCAAGCTTAGAATCAGAAGTGGTATCTACCCATACATTTATAAGCATGAGAAATTCTTCCAAATCAAGTGATGGCCATACACTAAGTAATATCTCACGTCAAATCTCTCCAGTTGCGAGCCGGCGTTTTCCTCGTAATTTGCATACAAGCTTGCGGAGGTCTCCCTCTCCAATATCTAGTCCTCGTACTACATCTGCCTCACATACACCGCGCGGTGGTGGCAGCACCAGCGGTGGTGTAATCCCATTTCATCAAACAAATCAACCAACATTCTCATATGAAGCCATGCATGAAAAATTTAGGGTCATTCCAGAAACAAACCATGCATGTAGCTGCAAGGATAAAACCTCTTCAGATAATGATACCAATGGAAACCATATTAGGAGGAAAGAGCATGGAAAT 2475 0.402 MPSWWGKSSSKRTTNKESIFDTIQRKFRNAAEDSCNGKSGGTKRYHGKSPSGKGCRSTVPSRSTSPLVHVSRSKSLEQRSNHSQLLPLPDLNRATINDGNHGICKTSELQRDRSTKPSQKFPIAETLYASLKRDSNDTERDIVTTYVSSDNSLNTGDSSDSHLFSHSASDCENGSKANTNSSYRMVQKDQSHITVQETSKAAPQVCNSKHLHTSTKGSPLYPQDRQIKSDTKGLPSALNSSRSFSSISSMRSFGPDQVLNLRLSTGNPSPDIASGHCSSSSSGHNSSHNFVSGETSRQIFWQQNKCSPECSPKPSQKMRSPSPSSKIHCASSTPMRQRARNAIEESAARHHDDAKQETHRLPLPLITITSPSPFSPTYSVSSTPSAHRSPVRRQNPTSPGSHWKKGKLLGRGTFGHVFLGFNSQSGELCAMKEVPIFYDDPKSMESVQQLEQEIALLSRFRHPNIVQYYGSEMVDDRLYIYLEYVSGGSIYKLLQQYGEFSEIVVRNYTRQILFGLAYLHAKNTVHRDIKGANILVDPNGWIKLADFGIAKHISGHSSPFSFKGSPYWMAPEVIKNTIGCNLAVDIWSLGCTVLEMATTKPPWSDYEGVAAMFKIGISKDNPTIPDHLSEDGKDFVRLCLQRNPQNRPSAAQLLEHPFVNNVTPERPILTNDPSDAQAAIINAAIGPTKHSSSLESEVVSTHTFISMRNSSKSSDGHTLSNISRQISPVASRRFPRNLHTSLRRSPSPISSPRTTSASHTPRGGGSTSGGVIPFHQTNQPTFSYEAMHEKFRVIPETNHACSCKDKTSSDNDTNGNHIRRKEHGN 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1393 825 MobiDBLite consensus disorder prediction 801 825 - -
Lal15g1393 825 ProSitePatterns Protein kinases ATP-binding region signature. 409 432 IPR017441 GO:0005524
Lal15g1393 825 SUPERFAMILY Protein kinase-like (PK-like) 401 749 IPR011009 -
Lal15g1393 825 MobiDBLite consensus disorder prediction 740 777 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 374 406 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 374 401 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 708 730 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 1 17 - -
Lal15g1393 825 ProSiteProfiles Protein kinase domain profile. 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1393 825 MobiDBLite consensus disorder prediction 1 83 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 708 777 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 803 825 - -
Lal15g1393 825 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 792 - -
Lal15g1393 825 SMART serkin_6 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1393 825 MobiDBLite consensus disorder prediction 149 339 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 18 32 - -
Lal15g1393 825 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 792 - -
Lal15g1393 825 Gene3D Transferase(Phosphotransferase) domain 1 401 683 - -
Lal15g1393 825 MobiDBLite consensus disorder prediction 54 83 - -
Lal15g1393 825 CDD STKc_MEKK1_plant 403 659 - -
Lal15g1393 825 Pfam Protein kinase domain 404 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1393 Lal-Chr15 16104818 16110124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1393 1 789 MAP Kinase Kinase Kinase AT1G63700 51.930 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal15g1393 Pkinase 4.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1393 K20717 - gmx:100814422 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1393 15 16104818 16110124 Lal15g1393 15 16104818 16110124 ECH
Lal15g1393 15 16104818 16110124 Lal17g0739 17 5268767 5274525 PCT
Lal15g1393 15 16104818 16110124 Lal21g0664 21 5135985 5142060 PCT
Lal15g1393 15 16104818 16110124 Lal4g0627 4 4667493 4673371 PCT