Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1390 ATGCAGTTGGCGCCGGTGGGGCTAGGAAGCGGGGGAACAAGTAACTTAAATGGGTTCCCTCAGGGAGGTGTGAACCAAAGAGAAGCTTTGGGTGGCATGCTTGAAGATGGAATTGCATCCATAGATGGATTAAAATCTAATGAACTGTCCCAGCTCAAGCGAGGATTGCATGTGGATTTTTCAGATGCTAAACTAATGGAATTATTAAAATCAAACAGTTTGGATATTGCCTCAACCCAATTGCTTTTTAACATAGGAAATGGGATTGTTGGTAATATCTTTGAAAGGAAGGATGGTGATGTACCTCATGCTCAGCGTGCAGCATACATGTTGAGGAAAATTTTGCAAGTAATTGAGTTGCGCTTTTCGAATCAAGCGGAAGGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGAAAAGTACCAATCAAGAATGAATGCACTTGAAAGCCTTGCGGTAGGGACAACTGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGTTGAAGCTTGAGCAAAATAAGTTTGAGGAGAAGAAGAAACTTGAAGATCAGGATTTTTCTCAATTGAAGAAAGAAAAAGTTCGAAACGAAATTGAAATTTCTGCATTGAAGCAAGAATTGGAAATGGTCAAAAGAATGCACGGAGGACAGGTTTTGCAGTTGGAATTGCAAGCTAACGAATCTAAAGCTGAATATGAGAAAAAGATACAGGAACTTGAGCGTCATCTGGCCAACGCAAGGAAACAAGTGAAGGATCTGGAGGCATTTTCAGAATCCCGATATTTCAATTGGAAGAATAAAGAACATGCCTACCAAAGTTTCTTAAATTCCCAACACAGAGCTATCCAGAAATTGAGAGCTGGGATGAGGTCCATAAAAAATGAAGTGGTAAAAACAAAAGGAAGCTACATGGAAGAATTCAAGTACTTTGGAACCAAGCTCAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATAAAGTTCTTGCAGAAAATCGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAATTAGACCATTTCTTCCCGGGCAAAGTAAAAAACACTCAACAGTTGAGTTTGTTGGTGATGATGGAGATTTAATTGTTAGCAATCCTCTTAAACCAGGAAAAGAAAGTCGCAAACATTTTAAATTTAATAAGGTTTTTGATCAAGCAACAAGTCAAGAGGAAGTATTCATCGACACTCAACCACTAATTCGTTCTGTTCTTGATGGATACAATGTGTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACGATGAGTGGACCAAACCTATCATCAAATTCAGATTGGGGAGTCAACTACCGAGCACTCCATGATCTTTTCCATATCTCCCAGAGTAGGAAAAGCTCTATTGTCTATGAAGTTGGTGTTCAGATGGTTGAGATTTATAACGAACAATGTTTCCTTGACTTGCAAACACTTGGGATTTGGAATATTACCCAACCAAATGGGTTGTCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGACTGATGTCCTCGAGTTGATGAGTATTGGGTTGACAAATCGCGCTACTAGTGCCACAGCCTTGAACGAAAGAAGCAGTAGATCACACAGTGTTCTCTCAATTCATGTTCGTGGAACGGATTTGAAGACCAACTCTCTCTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGCGAAAGAGTAGATCGTTCTGAAGCAACTGGTGATAGGCTTAAGGAGGCTCAACATATAAACAAGTCACTATCAGCACTTGGAGATGTGATATTTGCTCTAGCACAAAAGAGTGCACATGTGCCATATAGGAATAGCAAGTTGACTCAACTTCTTCAGAGTTCATTAGGTGGTCAAGCAAAATCCCTGATGTTTGTACAGCTTAATCCTGATGTTGCCTCATATTCTGAAACTATAAGTGCCTTGAAGTTTGCTGAGAGAGTTTCTGGTGTTGAGTTAGGTGCTGCTCGCAGCAACAAAGAGGGAAGGGATGTGAGGGAACTTATGGAGCAGGTAGCATCTCTGAAGGATACAGTTGCAAGGAAGGATGAAGAGATTGAGTGGTTGCAGTCACAGAAGGCTAATCACAATGGTTCTAAGCTAGGTATGACCTCAGTAAGGCGCGAGTTATCATCTTCAATGAGACATTCCGTAGGGACTCCCCGACACAGCAAGAGGCTTCCAGGAGCAAGGAGCTTTGGAGTCAAAGAAAAAGCAGCTTCGGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGACGATTTCAGAAACAAGTCTAGTTCCCTACAGTTGAAATTCGACAAAGAAGATATCAATCAAAATTTGAATGCAGACACTGAACTCGTAGGATTTGGAGATGCAGATTCGGAGGTGAGATTGAGTGACATATCTGATGGTGGTCTGTCAATGGGAACAGAAACCGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGATGTTGAGAAGGCAGCTGAAACTACACCTTCTAAGAACACAACAGCAGACAATCTTCCAGCCCAGAGCACGGAAAAACGCATTGTAGCATCCAGAATTCCCAAAGCTGCACAAGACGCACCAAAACTGAAGACAAGATCTTCCAGACTATCATTGAATAGAAGCTCGTCGAAAGTTTTATCAAGTCTTAGAAAACCGACAGCCAGTAGCTCTTCTTCAGTTAAGTCCTCCAAACGATTGCAATAA 2793 0.4107 MQLAPVGLGSGGTSNLNGFPQGGVNQREALGGMLEDGIASIDGLKSNELSQLKRGLHVDFSDAKLMELLKSNSLDIASTQLLFNIGNGIVGNIFERKDGDVPHAQRAAYMLRKILQVIELRFSNQAEGMKNQNNLFKAREEKYQSRMNALESLAVGTTEENEVVTGWVQQLKLEQNKFEEKKKLEDQDFSQLKKEKVRNEIEISALKQELEMVKRMHGGQVLQLELQANESKAEYEKKIQELERHLANARKQVKDLEAFSESRYFNWKNKEHAYQSFLNSQHRAIQKLRAGMRSIKNEVVKTKGSYMEEFKYFGTKLKGLAEAAENYHKVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSKKHSTVEFVGDDGDLIVSNPLKPGKESRKHFKFNKVFDQATSQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNLSSNSDWGVNYRALHDLFHISQSRKSSIVYEVGVQMVEIYNEQCFLDLQTLGIWNITQPNGLSVPDASMHSVNSMTDVLELMSIGLTNRATSATALNERSSRSHSVLSIHVRGTDLKTNSLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQSSLGGQAKSLMFVQLNPDVASYSETISALKFAERVSGVELGAARSNKEGRDVRELMEQVASLKDTVARKDEEIEWLQSQKANHNGSKLGMTSVRRELSSSMRHSVGTPRHSKRLPGARSFGVKEKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLQLKFDKEDINQNLNADTELVGFGDADSEVRLSDISDGGLSMGTETDGSISSIVEYTLFPDVEKAAETTPSKNTTADNLPAQSTEKRIVASRIPKAAQDAPKLKTRSSRLSLNRSSSKVLSSLRKPTASSSSSVKSSKRLQ 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1390 930 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 25 930 - -
Lal15g1390 930 Pfam Kinesin motor domain 353 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 ProSiteProfiles Kinesin motor domain profile. 347 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 Coils Coil 168 209 - -
Lal15g1390 930 MobiDBLite consensus disorder prediction 755 780 - -
Lal15g1390 930 MobiDBLite consensus disorder prediction 855 930 - -
Lal15g1390 930 MobiDBLite consensus disorder prediction 727 784 - -
Lal15g1390 930 Coils Coil 683 710 - -
Lal15g1390 930 MobiDBLite consensus disorder prediction 893 930 - -
Lal15g1390 930 Coils Coil 221 259 - -
Lal15g1390 930 Gene3D Kinesin motor domain 289 671 IPR036961 -
Lal15g1390 930 Coils Coil 320 347 - -
Lal15g1390 930 PRINTS Kinesin heavy chain signature 422 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 PRINTS Kinesin heavy chain signature 539 556 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 PRINTS Kinesin heavy chain signature 570 588 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 PRINTS Kinesin heavy chain signature 619 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 SMART kinesin_4 345 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g1390 930 MobiDBLite consensus disorder prediction 856 874 - -
Lal15g1390 930 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 930 - -
Lal15g1390 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 707 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1390 Lal-Chr15 16064120 16071744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1390 316 703 Calmodulin-binding Proteins AT5G65930 39.547 6.64e-72 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1390 K10406 - gmx:100777089 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1390 15 16064120 16071744 Lal15g1390 15 16064120 16071744 ECH
Lal16g1211 16 8423337 8431702 Lal15g1390 15 16064120 16071744 LSH