Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1389 ATGTCTGGATGCAATAAATTGCCGAAAAGCGATAAACATTCTATTAAATATCGGTCGAAACAATATAGGGGGTCATCCATTGAGGCTGATATTTCTTGTGTAGATTATAAGCCTTGTTTTTCCAATAATGAGAGTGAAAAAAGCTATAGGAGTTCTGAATTTAAATCCCCTGAAATACTGAGCACGCCTCAGCTCATTTCGGCAATAGGCCGGATATGGGATTCGACTAGTCGACCACTTTCGTTTTTCCTCCCCGAGGCAAAAGTGAATGAAGATGATCAAGGGTTCCAGAAAGAGAAGATTTTTGATATCATCGATGAGAAAAGGAATGGCAGAACATTTATTTTAGATAACACTAATTACTTCCCTATTAGTTCAAGCATTGTGCAGCAAAATTTGGATTTCCCCAAGGTAACACAGAAGATGTCAGTATTTAAATCCTTTAGTCATAGTGAAGATTACGTTCATTTTTTATTCCAGAGATTTGGGAATGCGGGTGGTAACAATTCAAATAAAAATCGGAAAGATGCGGAAATTGGGAGTGGAGAAATTACATTTAAATCAGGAAATGTGTATTGGTGGATGCGTAGGAATGCTGCTAAAGGACTAGCAGATCATGTGAAGGTTACTGAGTCTGAGAATATGAAAACTCATTCTCCTTTGGTGGATGAGGAATGTGTTTCAGTAGATACAATCACCCCTGCAGTGGATAATAAGAATGATGAGTGCAATGCTGTTTTATTCTTACAAAAAGGTCTACCACTATCTAAGGATGCAAATCTGGAAACAAGAAAAGCTAGCCCTCTGTGTTCAGACTATTTCCTTCATGTTGTGCCTGATACTAAAGCAGATATTGATTATTGTCAGACCTCGTCTTCTAGCATCTATGCAGACTATCATATTAACTATATACCTACCTGTAATAGTGCTTCTACACCGTGCCAACACAAAATTGATACTAATGAATTGTTGGAAGTCCAAAGAAAACATTTCTTTGATGAAACTGATGAGGAACCTAAGGTTCAGATCTTCTCTGCAACCCCTCAGAAGCCTCAATTTTCCCTTGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGTGTATGTGTCAGTCTTTGTCTGCATCCTGTTGACACAGTTAAGACAGTCATTCAATCATGTCGCGCTGAACAGAGGTCTATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTTCTGGGCTATATCGTGGAATTACCTCAAACATTGCATCTTCTGCTCCAATTTCTGCAGTTTATACTTTCACCTATGAATCAGTTAAAGCAGCTTTGGTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCGTTGCTACCTCTCTTATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGGTCTCATTACCGCAACTGCTGGGATGCATTGGTTGGAATTATAAGAAGCGGTGGTTTTCCCTCCCTATATGCGGGTTGGGGAGCGGTACTGTGCCGAAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTAGTATTCAACATAACACATTTCAGACTTTAGTGTGTGGAGGAATAGCTGGATCTACTGCTGCTTTATGCACAACTCCGTTTGATGTGATCAAGACAAGGTTACAAACACAGATTCCAGGATCTAGAAACCAATATGATAGTGTGTTCCATGCCCTTTACAAAATTAGCAAAAGTGAAGGTTTGAAAGGCTTATACAGGGGATTGACTCCAAGGTTGATTATGTACATGTCTCAAGGATCTATGTTCTTTGCTTCATATGAATTTTTCAAGAGGATATTTTCTTTGGAAGAGGGTGAGTCTCGACACAACAGTAAGGTTGCTGCCTCATGA 1932 0.3934 MSGCNKLPKSDKHSIKYRSKQYRGSSIEADISCVDYKPCFSNNESEKSYRSSEFKSPEILSTPQLISAIGRIWDSTSRPLSFFLPEAKVNEDDQGFQKEKIFDIIDEKRNGRTFILDNTNYFPISSSIVQQNLDFPKVTQKMSVFKSFSHSEDYVHFLFQRFGNAGGNNSNKNRKDAEIGSGEITFKSGNVYWWMRRNAAKGLADHVKVTESENMKTHSPLVDEECVSVDTITPAVDNKNDECNAVLFLQKGLPLSKDANLETRKASPLCSDYFLHVVPDTKADIDYCQTSSSSIYADYHINYIPTCNSASTPCQHKIDTNELLEVQRKHFFDETDEEPKVQIFSATPQKPQFSLAKQEHAFSGALAGVCVSLCLHPVDTVKTVIQSCRAEQRSIFYIGKSIVSDRGFSGLYRGITSNIASSAPISAVYTFTYESVKAALVPYLPKEYYSFAHCVGGGCASVATSLIFTPSERIKQQMQVGSHYRNCWDALVGIIRSGGFPSLYAGWGAVLCRNVPHSIIKFYTYESLKQVMPSSIQHNTFQTLVCGGIAGSTAALCTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKSEGLKGLYRGLTPRLIMYMSQGSMFFASYEFFKRIFSLEEGESRHNSKVAAS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1389 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 448 531 IPR018108 -
Lal15g1389 643 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 634 - -
Lal15g1389 643 SUPERFAMILY Mitochondrial carrier 359 623 IPR023395 -
Lal15g1389 643 Pfam Mitochondrial carrier protein 359 440 IPR018108 -
Lal15g1389 643 Pfam Mitochondrial carrier protein 449 532 IPR018108 -
Lal15g1389 643 Pfam Mitochondrial carrier protein 539 628 IPR018108 -
Lal15g1389 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 355 439 IPR018108 -
Lal15g1389 643 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 634 - -
Lal15g1389 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 538 626 IPR018108 -
Lal15g1389 643 Gene3D Mitochondrial carrier domain 328 446 IPR023395 -
Lal15g1389 643 Gene3D Mitochondrial carrier domain 447 643 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1389 Lal-Chr15 16050041 16055165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1389 337 627 Chloroplast and Mitochondria Gene Families AT1G07030 31.922 3.44e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1389 - - gmx:100812271 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1389 15 16050041 16055165 Lal15g1389 15 16050041 16055165 ECH