Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1385 ATGGGTTGTAACTTTTCGAAGTGCACTGCATGCTGTTGGAGTACAGAGCAGCCACAAGATCATCCGCTTCCTGAGGTTCATGTTGATGAAAATGAAGACAACAATGAGGGAAGTGGTTTGCAACCATTTCATGAATTCACATTTGATCAGATTAGGAATGCTACATCTGGGTTTGCAGTAGAAAATATAGTTTCTGAGCATGGAGAAAAGGCGCCAAATGTAGTCTATAAAGGGAAACTCGAAAACCAAATGCGAATTGCTGTGAAACGGTTCAACAGATCAGCCTGGCCAGATATCCAGCAATTTTTGGGAGAGGCCAGAGCTGTCGGTCAGTTAAGGAACCAAAGATTGGCGAATCTGCTTGGATGTTGCTGTGAAGGTGAAGAGAGGTTACTCGTTGCCGAATATATGCCCAATGACACTTTGGCAAAACACTTGTTCCATTGGGAAACTCAGCCCATGAAATGGGCTATGCGACTGAGAGTTGCTTTACATCTTGCCCAAGCTCTAGAGTACTGTACCAACAAAGGACGTGCTCTATATCATGATCTAAATGCTTACAGAGTTCTTTTTGATGATGAATACAATCCCAGGCTTTCATGCTTCGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACAAATTTGGCATTTACTCCACCCGAGTATCTTAGGACAGGTAGAGTTACACCAGAGAGTGTAACTTACAGCTTTGGGACCCTTTTGCTTGATCTTCTCAGTGGAAAACATATCCCTCCAAGCCATGCCCTTGACCTGATAAGGGACAAGAACCTTCAGATGCTAACAGACTCTTGTTTAGAAGAACAATTTACAAATGACGAGGGGGTTGATTTAGTTCGTCTGGCCTCACAATGTTTGCAATCTGAACCGCGAGAGCGCCCTAACCCAAAATCATTGGCTACTGCTCTTATACCACTGCAGAAAGATTCTGAGGTTCCTTCTCTTGTGCTGATGGGTATACCAGATAGCAATGCTGCAGTTCCCCTTTCTCCGCTTGGTGAAGCTTGTCAACGAATGGATCTGACTGTCTTACATGAGGTGCTAGAGAAACTTGGGTATAAAGATGACGAGGGTACGACGACTGAGCTTTCGTTCCAAATGTGGACAAACCAGATGCAGGAGACATTGGATTCGAAGAAGAAAGGGGATGGTGCTTTTCGGCAGAAAGACTTTAAAACTGCTATTGATAATTATACACAGTTCATCGAAGTTGGAACAATGATTTCGCCGACAATGTATGCACGTCGAAGTCTGTCATATCTCATGAACAATATGCCAGAAGAAGCACTTGCTGATGCAATGCAGGCACAAATAATATCTCCTGTTTGGCACATTGCATCTTATTTGCAAGCTGTTGTTCTTTTAGCACTGGGAAGGGATCATGAGGCCCAATTGGCACTTAAAGAGGGTACTATACTTGAAACTAAAAAGAACATAAATAAGTAG 1473 0.4297 MGCNFSKCTACCWSTEQPQDHPLPEVHVDENEDNNEGSGLQPFHEFTFDQIRNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRSAWPDIQQFLGEARAVGQLRNQRLANLLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCTNKGRALYHDLNAYRVLFDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLTDSCLEEQFTNDEGVDLVRLASQCLQSEPRERPNPKSLATALIPLQKDSEVPSLVLMGIPDSNAAVPLSPLGEACQRMDLTVLHEVLEKLGYKDDEGTTTELSFQMWTNQMQETLDSKKKGDGAFRQKDFKTAIDNYTQFIEVGTMISPTMYARRSLSYLMNNMPEEALADAMQAQIISPVWHIASYLQAVVLLALGRDHEAQLALKEGTILETKKNINK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1385 490 PANTHER TPR DOMAIN KINASE 1 489 - -
Lal15g1385 490 Gene3D Transferase(Phosphotransferase) domain 1 138 328 - -
Lal15g1385 490 Pfam Protein tyrosine and serine/threonine kinase 74 310 IPR001245 GO:0004672|GO:0006468
Lal15g1385 490 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Lal15g1385 490 ProSiteProfiles Protein kinase domain profile. 61 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1385 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Lal15g1385 490 Gene3D Phosphorylase Kinase; domain 1 31 136 - -
Lal15g1385 490 SUPERFAMILY TPR-like 388 479 IPR011990 GO:0005515
Lal15g1385 490 Gene3D Tetratricopeptide repeat domain 381 490 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1385 Lal-Chr15 16013474 16020012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1385 21 312 Glycoside Hydrolase AT3G07070 33.025 1.54e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal15g1385 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1385 K14500 - gmx:100819210 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1385 15 16013474 16020012 Lal15g1385 15 16013474 16020012 ECH
Lal16g1215 16 8459050 8467354 Lal15g1385 15 16013474 16020012 LSH