Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1376 ATGAATGTAGGTAAGGGAAGTGATCCAGAGTGGAATGAAACTTTTATATTCAACTTATCTGAAGGCATTTCTGAACTCAAAATGAAGATCATGGACAGTGATACCTTAACAGCTCATGATCTAGTAGGAGAAGTTAACATTCCATTAGAACCTTTGTTTATTGAAGGAAACCTACCAGCCACAGTATACAATGTTGTCAAAGATGGGCACTATTGTGGAGAGATTAGGGTTGGCCTTAGTTTTAGGCCTGAGGAACGTCGTGATCGAGGATTAGAGGAAAATTTTGGTGGATGGAAGGAATCTACTTACCAAGATTGA 318 0.3899 MNVGKGSDPEWNETFIFNLSEGISELKMKIMDSDTLTAHDLVGEVNIPLEPLFIEGNLPATVYNVVKDGHYCGEIRVGLSFRPEERRDRGLEENFGGWKESTYQD 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1376 105 Gene3D C2 domain 2 84 IPR035892 -
Lal15g1376 105 PANTHER C2 DOMAIN-CONTAINING 3 101 - -
Lal15g1376 105 Pfam C2 domain 5 53 IPR000008 -
Lal15g1376 105 PANTHER OS02G0640000 PROTEIN 3 101 - -
Lal15g1376 105 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 83 IPR035892 -
Lal15g1376 105 ProSiteProfiles C2 domain profile. 1 62 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1376 Lal-Chr15 15894730 15895374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1376 8 52 C2H2 Transcription Factor Family AT4G05330 33.333 2.27e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1376 - - gmx:100806391 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1233 16 8597706 8600285 Lal15g1376 15 15894730 15895374 LSH