Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1370 ATGTTGGCCGGGTGTTCTAGTGCAACATTGTTGTCACCAAGGCATAGATTGAGGACTGAAGTATCATCACCTGCACAGTTTCAACGCCAAGGCTGCAATCTTCAGCTACCATCTTCCATGAGCACACACGGATTGGATTTACCATCATCATGCGGATTTCCGCGAAAAGACACATCGGGTTCGCAACAACAATCATTGAAGAAGCCTATGGCACTTTCAGTGGAGAAACAGATGGAAGCCAAGACAAGATCTTGTTCTTTGAAGAAGCACAATATTCGATTTCCGCCTTTGGCAGCAGCAGCAGCATCGGCAGCAACAAGCAATCAAACAATGGCATTTGTGGAACATGGAGAAGTTACCAATGAGTTTTGGGAAAAGGGTGGTAAGGGTTTGAAGAGGCTTGCAGAAGATGGTTCGGTTGACGAATCGGTTGCGGTCAGAGCGAAGAGGAAAAATTGTAGAAGTGGTAATGGTAGTTTTGGTGACATTCTTGAAGGAGGAGATAGTTTGAGTTTAGCACAAATTGGTGCTGGCAACTTTTGGTTTCAAAACCCTTCAATTCCTTTGTCACTGACTTGTTCAAGGGAAGAGGAAATGGTGTGCTTTGTTCCTAGTGAAGTGGTTTCTGCACCTTTGCCATTATCCAACAATCATCAGTGGGGGGGAATTGAGTCTGCTGTGACTAAGATCACGAATTTCGGCGAAAAGAATCTTATTGAGGGTAGCCAACCTCTTGTGAAGGAAGGTTCATTGTCCAATTGTTCATCAGAAAGCCGAAGCTTGAGTTTGAGGCTAAATGAGAATGCATCATCAGAACATGAAGTTGGTAGTGGTTCAAGGGGTCCTTATCATCATGAAGACACAGAGGTTGAGACAGGTGAGGACGATGACCAAGAGAATTATCGCGGGTTTGAGCTCGTTAGTTTTCTAATGGCTTGTGTCGATTCTATTGGATCAAAGAATGTCGCCGCAATCAACCATTTCATTGCAAAATTGGGTGATCTTGCATCTCCAAGAGGAACCACGATAAGCCGAATTTGTGCTTATTTTACAGAAGCCTTAGCTATAAGGGTTTCTAGGCTTTGGCCTCGGATTTTCCATATAACCATTTCAAGAGAGCTAGAAAGAGTGGTGGATGAGGAATCTGACAATGCACTAAGACTTCTGAACCAAGTTACCCCAATTCCGAAGTTCTTGCATTTTACTTCCAATGAGATGTTGTTGAGGGCTTTTGAAGGGAAAGACAAGGTTCACATTATAGATTTCGATATAAAGCAGGGGCTTCAATGGCCTAGCTTGTTTCAAAGTTTAGCTTCAAGGACTAACCCTCCAAGCCATGTTAGAATCACGGGCATCGGAGAATCCAAGCAAGAGCTGAATGAGACTGGTGACAGGCTTGCAGGTTTTGCCGAGGCATTCAACCTTCCGTTTGAGTTTCATCCAGTTGTGGATAGACTTGAAGATGTCAGGCTTTGGATGCTTCATGTGAAGGAGCAAGAAAGTGTGGCTGTGAACTTCGCTTTGCAGCTTCACAAAACCCTTTATGATGGAACTGGAGGAGCATTGAGGGATTTTTTAGGCCTCGTCCGTAGCACGAATCCTACTGTTGTTGTTATGGCTGAGCAAGAAGCAGAACACAATGATTCAAGGTTGGAAACAAGAGTGTGCAATGCCTTAAAATATTACTCAGCTTTGTTTGATTCAATTGATCACTGTCTTCCACAAGAGAGTCCTATGAGGATTAAGATAGAGGAGATGTATGGTAGGGAGATAAGGAACATCATTGCTTGTGAAGGAAATCACAGACTGGAGCGGCACGAGAGTTTCGGGAATTGGAGGAAAATGATGGTGGAACAAGGAGGGTTCAAATGCATGGGAGTTACTGAGAGGGAAATGTTTCAAAGCCAGTTGCTGTTGAAGATGTACCTTTGTGAGAATTACAATGTGAAGAAGCAAGAGAAAGAAGGAGCAGCTGGAGTTACATTGAGTTGGCTACAGCAACCTTTATATACAGTTTCGGCATGGACACCGGTTGATGCTGCTGGAATCTCATCCTCTTTTTCTCAGCCAGCTTAA 2076 0.4383 MLAGCSSATLLSPRHRLRTEVSSPAQFQRQGCNLQLPSSMSTHGLDLPSSCGFPRKDTSGSQQQSLKKPMALSVEKQMEAKTRSCSLKKHNIRFPPLAAAAASAATSNQTMAFVEHGEVTNEFWEKGGKGLKRLAEDGSVDESVAVRAKRKNCRSGNGSFGDILEGGDSLSLAQIGAGNFWFQNPSIPLSLTCSREEEMVCFVPSEVVSAPLPLSNNHQWGGIESAVTKITNFGEKNLIEGSQPLVKEGSLSNCSSESRSLSLRLNENASSEHEVGSGSRGPYHHEDTEVETGEDDDQENYRGFELVSFLMACVDSIGSKNVAAINHFIAKLGDLASPRGTTISRICAYFTEALAIRVSRLWPRIFHITISRELERVVDEESDNALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEAFNLPFEFHPVVDRLEDVRLWMLHVKEQESVAVNFALQLHKTLYDGTGGALRDFLGLVRSTNPTVVVMAEQEAEHNDSRLETRVCNALKYYSALFDSIDHCLPQESPMRIKIEEMYGREIRNIIACEGNHRLERHESFGNWRKMMVEQGGFKCMGVTEREMFQSQLLLKMYLCENYNVKKQEKEGAAGVTLSWLQQPLYTVSAWTPVDAAGISSSFSQPA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1370 691 Pfam GRAS domain family 306 676 IPR005202 -
Lal15g1370 691 MobiDBLite consensus disorder prediction 54 70 - -
Lal15g1370 691 MobiDBLite consensus disorder prediction 264 298 - -
Lal15g1370 691 MobiDBLite consensus disorder prediction 38 70 - -
Lal15g1370 691 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 680 IPR005202 -
Lal15g1370 691 ProSiteProfiles GRAS family profile. 297 676 IPR005202 -
Lal15g1370 691 PANTHER SCARECROW-LIKE PROTEIN 28 7 680 IPR030027 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1370 Lal-Chr15 15835226 15837301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1370 1 676 GRAS Transcription Factor Family AT1G63100 53.824 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal15g1370 GRAS 5.5e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1370 - - lang:109333178 1096.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1370 15 15835226 15837301 Lal16g1237 16 8630188 8632206 LSH