Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1362 CTACATTTATCAAAGTCATGCTATGTGACCATTGACCAACATTTGTTAATAACCAATAAAAGCAATTTCTCATCAGTCTATAAAGGAGTCCTAAGAGATGGTTATGTTGTGGCTATTAGAAGCATTAGTGTGACATGCTGCAAAACTGAGGAAGCTGAATTTGTCAAAGGGTTGAGCCTATTAACCTCACTGAGACATGAAAACATTGTTAAGATGAGAGGTTTCTGTTACTCTAGGAGTAGAGGTGAATGGTTCCTTATCTATGATTTTGCCATCAAGGGTAATCTGTCTCAATATCTTGACTTGGAAGATGGAAGTGAACATGTGCTTGAATGGTCCAAGAAAGTTCTATCATCAAAGGCATTGCAAAAGTCAATACTTTTCAAAACACGAGTGTTCTCTGGTTATTTGTGGACTGTGGTAGCCGGTATTGGATATCTGCACAGAAATGAAGAAACCAAACCTACCATACTACACCAAAATATTTCAGTTGAAAAAGTTCTTCTTGACAATAAGTTTAACCCATTGATCATGGATGCTGGCCTCCCTAAGCTTCTAGCAGATGATGTTGTTTTCTCAACTCTTAAAATAAGTGCTGCCATGGGATATCTAGCTCCTGAATATATTAGCACAGTACACTTCACAGAGAAGTGTGACATATATGCATTTGGTGTTATTGTTCTTCAAGTCCTATATGGGAAGACAACAATAAGAATCTCAATCCGAATAGCAGTCGAGTCTTTCAGCTTGCAATGTTGTGCACACATGAGCTTCCTGAACAAAGGCCAACCATGA 795 0.3824 LHLSKSCYVTIDQHLLITNKSNFSSVYKGVLRDGYVVAIRSISVTCCKTEEAEFVKGLSLLTSLRHENIVKMRGFCYSRSRGEWFLIYDFAIKGNLSQYLDLEDGSEHVLEWSKKVLSSKALQKSILFKTRVFSGYLWTVVAGIGYLHRNEETKPTILHQNISVEKVLLDNKFNPLIMDAGLPKLLADDVVFSTLKISAAMGYLAPEYISTVHFTEKCDIYAFGVIVLQVLYGKTTIRISIRIAVESFSLQCCAHMSFLNKGQP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1362 264 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 17 251 - -
Lal15g1362 264 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 251 - -
Lal15g1362 264 Gene3D Transferase(Phosphotransferase) domain 1 93 248 - -
Lal15g1362 264 SUPERFAMILY Protein kinase-like (PK-like) 21 236 IPR011009 -
Lal15g1362 264 Pfam Protein tyrosine and serine/threonine kinase 21 234 IPR001245 GO:0004672|GO:0006468
Lal15g1362 264 ProSiteProfiles Protein kinase domain profile. 12 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1362 264 Gene3D Phosphorylase Kinase; domain 1 12 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1362 Lal-Chr15 15742900 15744174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1362 20 124 Miscellaneous Gene Families AT4G22730 58.491 5.01e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lal15g1362 PK_Tyr_Ser-Thr 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1362 - - var:108335660 329.331