Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1352 ATGGAGGCCAGTGGCGGAGTTAGCGGCGGCGTTACGGTGGTGGGATCGGATGCTCCGTCGGAATACCATATAGCTCCGAGGACGGAAGACTCAGCTCCGGGAAGCGGATCCACTGCACCGATTCCGGCGACTCAAGCGAGTGCTCCGCCGCCACTTGCGGCGGAATTGACAGCGCAGGTGGCGGGAACAGCTGTACCGGAGAAGAAAAAGAGGGGCCGGCCTAGAAAGTATGCACGGGACGGTTCGGTGCTGTCTCCGAAGCCGATATCTTCTGCCGCTCCTATGCCGCCGGTGATTGATTTCTCGTCGGAGAAGCGCGGGAAAGTGAAACCAATCTCAGTGAGCAAAGCCAAGTTTGAGATAGTGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCTCATATCATCAATGTTAATGCTGGTGAGGATGTTACCATGAAAGTAATATCATTTTCTCAGCAACGGTGTCGAACTATATGCATTCTTTCGGCAAATGGTATCATATCGAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGTACATTGACATACGAGGGAAAGTTTGAAATTCTGTCTTTATCTGGCTCATTCATGCCTAGTGATGGTGGAGGAACACGAAGCAGATCGGGAGGCATGAGTGTTTGTTTAGCTAGTCCGGATGGACGTGTTGTAGGTGGCGGTGTAGCTGGTCTATTGGTGGCTGCCAGTCCTGTGCAGGTAGTGGTAGGAAGTTTTCTGGCAGGAAATCAACACGATCGGAGGCCGAAAAAGCAGAAATACGAGGTTATATCGACTGTGACACCGGCTGCAATTGTTCCAATCTCTACTACTGATCCAATACCTTTTCTATCATCAACACCTTCGTTCCGAGTCGATAACTGGTCTGCCATGCCAGCGGACGCTACAAATAAGCAAACCGATGTTAATGCGACACTTCCTGGAGGGTAA 966 0.5072 MEASGGVSGGVTVVGSDAPSEYHIAPRTEDSAPGSGSTAPIPATQASAPPPLAAELTAQVAGTAVPEKKKRGRPRKYARDGSVLSPKPISSAAPMPPVIDFSSEKRGKVKPISVSKAKFEIVNLGEWVACSVGANFTPHIINVNAGEDVTMKVISFSQQRCRTICILSANGIISSVTLRQPDSSGGTLTYEGKFEILSLSGSFMPSDGGGTRSRSGGMSVCLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHDRRPKKQKYEVISTVTPAAIVPISTTDPIPFLSSTPSFRVDNWSAMPADATNKQTDVNATLPGG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1352 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 319 IPR039605 GO:0003680
Lal15g1352 321 MobiDBLite consensus disorder prediction 1 89 - -
Lal15g1352 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 319 - -
Lal15g1352 321 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Lal15g1352 321 ProSiteProfiles PPC domain profile profile. 133 272 IPR005175 -
Lal15g1352 321 CDD DUF296 137 228 IPR005175 -
Lal15g1352 321 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 256 - -
Lal15g1352 321 Gene3D - 138 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1352 Lal-Chr15 15654626 15659382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1352 1 318 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.523 2.27e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1352 - - gmx:100794202 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1352 15 15654626 15659382 Lal15g1352 15 15654626 15659382 ECH