Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1350 ATGGTGACAATAAAGCTTGGGCTTTCTGTGCTGTTTTTGAATCTTGTTCTTTACATACCTGCCACATCAGAATTCGCCGTTTCAAAACGGTCCAACCCCTCAGAATTCATCAAATCCTCATGCAAATCCACTCTATACCCGACTATATGTGTTCATTGTCTCATTGGGTATGCGAATTCGATTCGCCAAAGCAAGCAATGGCTAGCCATAACAGCCTTGAACGTGAGCCTATCATGGACACGGTCATGTGCATCATTTGTGAAGAAGAAGATCAATATAAATGGAATCAAGCCTAGGGAGTATAGAGCTATGCAAGATTGCATAGAAAACATGGATAGTAGCGTGGATAGTCTTCAAAAATCGGCTAGAGAGTTGAACCTTATGGGTGATAACGCTATTAGTGAGAACTTTGATTGGCATATGAGCAACGTGCAAACTTGGGTTAGTGCTGCTTTGACTTATCAAAGCACTTGTCTTGATTCGTTTGCGGGTCCAAAAATGAATGGAAACTTGAAAGATACTATTAGGGGCAGAGTTATTATTGTTTCTCAAGTCACTAGTAATGCTCTTGCCTTGGTTAATCGTTTTGCCTCTAGGCATCAAACTACTACACTCAATAAAAAGCCTTAA 630 0.4048 MVTIKLGLSVLFLNLVLYIPATSEFAVSKRSNPSEFIKSSCKSTLYPTICVHCLIGYANSIRQSKQWLAITALNVSLSWTRSCASFVKKKININGIKPREYRAMQDCIENMDSSVDSLQKSARELNLMGDNAISENFDWHMSNVQTWVSAALTYQSTCLDSFAGPKMNGNLKDTIRGRVIIVSQVTSNALALVNRFASRHQTTTLNKKP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1350 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 200 - -
Lal15g1350 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 194 IPR006501 GO:0004857
Lal15g1350 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 196 IPR035513 -
Lal15g1350 209 Pfam Plant invertase/pectin methylesterase inhibitor 36 192 IPR006501 GO:0004857
Lal15g1350 209 PANTHER PECTINESTERASE INHIBITOR 9 15 200 - -
Lal15g1350 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 196 IPR035513 -
Lal15g1350 209 CDD PMEI-like_3 39 198 - -
Lal15g1350 209 SMART PMEI_2 32 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1350 Lal-Chr15 15616690 15617319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1350 19 193 Carbohydrate Esterase AT3G14310 30.556 7.07e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1350 - - jre:108984668 225.713