Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1307 ATGAGTTGTAACGGGTGTCGTGTTCTTCGAAAGGGTTGCAGTGAGTCATGTATCCTACGCCCTTGTTTGCAGTGGATCGAAAATCCTGAAGCTCAAGGCCACGCTACCGTTTTCGTAGCTAAATTTTTCGGACGTGCTTGTCTCATGTCTTTCATTTCCAACGTTTCTGAAACCCAAAGACCCGCTCTATTTCAGTCTCTGTTGTTTGAAGCGTGCGGTAGAACTGTGAACCCAGTGAACGGTGCCGTTGGGCTTTTATGGACCGGGAACTGGCACGTGTGTCAGGCGGCGGTGGATACGGTGCTCCGCGGCGGTAATCTGACGCCCTTGTCGGGGCTGTTCGGCATGGACGCGCTAACTCCGGGGACGGAGGAAGCATCTGAAACGGAAGTTACTTGCACAGAAATTTGGAGTAACCGAGATCAGAACATGAATTACCGGTTCATGAGCTCCCGATTCAACGGGTCTTCCACTTGCAGCGGCGGAAAACGTAAGAATCCTGAGGCGGCAGCGGTGGCGATTGATCTTGATCTTCGATTAACGCCGATTTTGTTGCAGAAGGTTTCCGATTACAATTCACGTCCGGAAAACCGTCGGCAGTGTTCGCCGTCGATGACGTCGGAGGAATCAGTTACGACGGTGGCGTGCTCGGAAAGTGGTAATCGCAGCGGAGAGAGAAAAGTTCTGAACCTTTTCATTTAA 702 0.5142 MSCNGCRVLRKGCSESCILRPCLQWIENPEAQGHATVFVAKFFGRACLMSFISNVSETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGNLTPLSGLFGMDALTPGTEEASETEVTCTEIWSNRDQNMNYRFMSSRFNGSSTCSGGKRKNPEAAAVAIDLDLRLTPILLQKVSDYNSRPENRRQCSPSMTSEESVTTVACSESGNRSGERKVLNLFI 233
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1307 233 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lal15g1307 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 233 - -
Lal15g1307 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 233 - -
Lal15g1307 233 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal15g1307 Lal-Chr15 14926512 14927791 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1307 1 228 AS2 family AT3G49940 58.921 7.80e-80 238
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal15g1307 LOB 5.6e-25 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1307 15 14926512 14927791 Lal15g1307 15 14926512 14927791 ECH
Lal16g0250 16 1490570 1491949 Lal15g1307 15 14926512 14927791 LSH
Lal15g1307 15 14926512 14927791 Lal16g1328 16 9536038 9537466 LSH
Lal15g1307 15 14926512 14927791 Lal24g0295 24 2124638 2126193 PCT
Lal15g1307 15 14926512 14927791 Lal16g0250 16 1490570 1491949 PCT
Lal15g1307 15 14926512 14927791 Lal15g1307 15 14926512 14927791 PCT
Lal16g1328 16 9536038 9537466 Lal15g1307 15 14926512 14927791 PCT