Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1284 ATGTCTCAACAACCACTCTTACTACACTTACCCCAAATTCAAGAAGACACAGCCTACGACTCCTCCGAAAAAATCATCATAGTTGGAGTTGATGAATCCGATGATGAATCAAACTATGGCCGTACCCCACCATTCTCATGGAAGAAGCTGTGGCTCTTTACTGGGCCCGGCTTCTTAATGAGCATCGCTTTTCTTGATCCCGGAAACCTCGAGGGTGACCTGCAAGCTGGAGCCATAGCAGGTTATTCACTGTTATGGCTCCTTACGTGGGCCACCCTCATGGGCCTTTTAATTCAACTCTTATCTGCTCGGCTAGGTGTAGCTACTGGGCGACACCTAGCCGAACTTTGTAGGGAAGAATACCCGACATGGGCTGGAATAGTGTTGTGGGTTATGGCTGAGGTTGCTCTTATTGGTTCTGATATTCAAGAAGTTATTGGGAGTGCTATTGCTATTAGGATTCTTAGCAATGGGTTTGTGCCTCTTTGGTTTGGAGTTATCATAACAGCTCTTGATTGTTTTGTTTTTCTCTTTCTTGAGAACTACGGTGTGAGGAAATTGGAAGCTTTTTTTGCTGTCCTTATTGGTATCATGACAATCGCGTTTGCGTGGATGTTTGGTGAAGCAAAGCCAAATGGCAAGGAACTTCTTATCGGTATTTTGGTTCCGAAACTTAGTTCCAGAACTATACACCAGGCTGTTGGAGTTGTCGGCTGCATTATTATGCCTCACAACGTATTTTTGCATTCTGCTCTTGTTCAATCAAGGCAGGTTGACCACAACAAGAAAGGCCGAGTTCAAGAAGCTCTCAATTATTACTCTATCGAATCCACCATTGCCCTTATAGTTTCTTTGGCCATTAATATATTTGTCACAACTGTGTTTGCTGATGGGTTTTACGGTACCGAAGTAGCAAACAATATTGGTCTTGCTAATGCAGGACACTATCTTCAGGAGAAGTATGGTGGCGGATTATTACCGATATTATATATATGGGGTATTGGGTTATTAGCAGCTGGCCAAGGCAGCACTCTTACCGGTACTTATGCTGGACAATTTATCATGGGAGGTTTTCTAAATTTGAAGTTGAAAAAATGGATGAGGGCATTAATTACACGAAGTTGTGCAATCATCCCGACCATGATTGTTGCTCTTATTTTCGATACCTCCGAGGATGCATTAGATGTTCTGAATGAGTGGCTTAATGTTCTCCAGTCAGTCCAAATCCCCTTTGCACTTATTCCTCTGCTTTGTTTGGTATCAAAGGAGCAGTTAATGGGAACTTTCAAAATCGGCCCTGTCCTCAAGATGATTTCATGGTTTGTGGCTGCTCTGTTGATCGTAATCAATGGCTATCTTTTGCTCGATTTCTTCTCTGCTGAAGTGAATGGAACAGTGTTCGCCACCGTGCTGTGTGCATTAACAGCTGCATATGTTGCATTCATAATGTACCTTGTCTCAAGAGCCATTACCTTTTCACCTTGGCAAAGTATAACACAAAAGAAGACAATTTCTAACTCAGAGAATTGA 1530 0.4268 MSQQPLLLHLPQIQEDTAYDSSEKIIIVGVDESDDESNYGRTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLTWATLMGLLIQLLSARLGVATGRHLAELCREEYPTWAGIVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWFGVIITALDCFVFLFLENYGVRKLEAFFAVLIGIMTIAFAWMFGEAKPNGKELLIGILVPKLSSRTIHQAVGVVGCIIMPHNVFLHSALVQSRQVDHNKKGRVQEALNYYSIESTIALIVSLAINIFVTTVFADGFYGTEVANNIGLANAGHYLQEKYGGGLLPILYIWGIGLLAAGQGSTLTGTYAGQFIMGGFLNLKLKKWMRALITRSCAIIPTMIVALIFDTSEDALDVLNEWLNVLQSVQIPFALIPLLCLVSKEQLMGTFKIGPVLKMISWFVAALLIVINGYLLLDFFSAEVNGTVFATVLCALTAAYVAFIMYLVSRAITFSPWQSITQKKTISNSEN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1284 509 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 12 508 - -
Lal15g1284 509 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 159 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 184 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal15g1284 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 12 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1284 Lal-Chr15 14591005 14595246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1284 24 495 Inorganic Solute Cotransporters AT2G23150 78.947 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1284 K21398 - gmx:100807811 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1284 15 14591005 14595246 Lal15g1284 15 14591005 14595246 ECH
Lal15g1284 15 14591005 14595246 Lal16g1341 16 9714393 9718737 LSH
Lal15g1284 15 14591005 14595246 Lal15g1284 15 14591005 14595246 PCT
Lal15g1284 15 14591005 14595246 Lal16g1341 16 9714393 9718737 PCT
Lal16g1341 16 9714393 9718737 Lal15g1284 15 14591005 14595246 PCT