Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1274 ATGGAAACAATTCCTTATTCATTCCCTTCCATCAAATCCAATTCTCTTATTATTTACACATCAACTTCACCATTTCCATCTTCCAACAAATCACCGTTATTCTCAACCAAACCCTTCTTTTCCGTCAAATCTCTCTCTCTCCGTCACCAAACTCTTCGTTTCGTCGCTAAATCTAGCCACAGAGACCACGACCATCATCATGACCATCGTGGTCATGACCATGATCATCATCATCATCATCATCATCATCATCATCCTTCGCACGGAATCGGCTTTGCGAATCTCACGAGACCTCAGAAAGTGGTTATCGGTTTCGCTAAAGCGAGCAGATGGATGGAGTTGGCTGACTTCTTAAGAGAGCATTTGTATCTTTGCTGTTTGTCAACTGCCTTGTTTGTGACTGCTGCTATTTGTCCTTATACATTGCCTAACCATCTCATCAAACCCTTTCAAAATTCTCTCATTTTCGTTGCTTTTCCTTTCGTTGGGGTTTCTGCTTCACTTGATGCTCTTATTGAAATCAGTAGCGGAAAAGTGAACATCCATGTGTTAATGGCAATGGCAGCATTTGCATCAGTTTTTATGGGAAATGCGTTGGAAGGAGGGTTACTTCTTGCCATGTTTAATCTCGCACATATAGCTGAGGAGTATTTTACCGGTCGTTCAATGATTGATGTTAAGGAATTGAAGGAAAACAATCCGGATTTTGCCCTTGTTCTGGATACGATTGATGGTATACTTCCGAATACTGTTGACTTGGCATATAAGAGGGTTCCTGTGCATGATGTGACTGTAGGATCATATATCTTGGTTGGTGCGGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTGGTGCCACCATTACCATTGAACACTTGACAGGGGAAGTCAAACCATTGGAGGCCAAAGCTGGAGATAGAATTCCTGGCGGTGCAAGGAACTTAGATGGGCGGATTATTGTTAAGGTAACAAAGACATGGAAGGAATCAACTCTCAACAGAATTGTGCAGTTGACTGAGGAAGCTCAGATGAATAAACCTAAACTTGAAAGGTGGCTAGATGAATTTGGTGAACGCTACAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTATTGGGCCACTTGTATTTAAGTGGCCATTCATTAGTACACCGGCTTGCAGAGGTTCTGTTTACAGAGCCCTAGGACTCATGGTGGCAGCATCGCCATGTGCCTTGGCTGTGGCCCCATTGGCATATGCTACAGCAATCAGCTCTTGTGCAAGAAAGGGAATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGACAGGAACGTTGACGACTGGTGGACTTGTATTCAAGGCGATTGAACCCATATATGGTCATCAAATTAGAAATAAATCTAATGTTTCTTCCTGCTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTTCTGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGTAAAGACCTCCCATCTGTTTCCGTTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAATGGCATTCAGTCAGGAACTGGTGGGGATAAACTATTGAAAGCAACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCTATCTGAAGATGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGATTTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTTGTATCATTGATTCACCTAGAGGATAATCCTCGTCCAGGGGTTGTTGATGTCATTCAAGAATTGCAAGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGACCATGAGCCCAGTGCTAGGAGAGTTGCTAGCGCTGTAGGCATCAATGAGTTTTACTGCAACCTGAAGCCTGAAGATAAACTGAGTCATGTAAAGGACATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTAGCAGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGCCATAGCTGTTGCAGATGTGTTGTTGCTTCGAGAAAATATTTCTGCAGTGCCATTCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCATTGTCCTGCATCGTCATGGCTTCTCTTCCATCTGTTTTGGGATATCTTCCTCTATGGTTAACAGTTCTTTTACATGAAGGTGGAACCTTGCTTGTGTGCCTCAATTCCATACGTGGTTTAAATGAACCATCTTGGTCCTGGAATCATGATATATTACATTTGATTAGCTGGGTTAATTCTAGATTACAATCTCTCAGGACAAATATCAATACCAAAAGCAGCATCACAACTGCAAATTTGTAA 2463 0.4247 METIPYSFPSIKSNSLIIYTSTSPFPSSNKSPLFSTKPFFSVKSLSLRHQTLRFVAKSSHRDHDHHHDHRGHDHDHHHHHHHHHHPSHGIGFANLTRPQKVVIGFAKASRWMELADFLREHLYLCCLSTALFVTAAICPYTLPNHLIKPFQNSLIFVAFPFVGVSASLDALIEISSGKVNIHVLMAMAAFASVFMGNALEGGLLLAMFNLAHIAEEYFTGRSMIDVKELKENNPDFALVLDTIDGILPNTVDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGGATITIEHLTGEVKPLEAKAGDRIPGGARNLDGRIIVKVTKTWKESTLNRIVQLTEEAQMNKPKLERWLDEFGERYSKVVVVLSIAIAVIGPLVFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCYTIAFDKTGTLTTGGLVFKAIEPIYGHQIRNKSNVSSCCIPTCEKEALAVASAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLTATVNGIQSGTGGDKLLKATLGSVDFITSFCLSEDESKKIKEAVNTSSYGSDFVHAALSVNQKVVSLIHLEDNPRPGVVDVIQELQEAKFRVMMLTGDHEPSARRVASAVGINEFYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSCIVMASLPSVLGYLPLWLTVLLHEGGTLLVCLNSIRGLNEPSWSWNHDILHLISWVNSRLQSLRTNINTKSSITTANL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1274 820 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 181 778 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lal15g1274 820 SUPERFAMILY Calcium ATPase, transmembrane domain M 183 761 IPR023298 -
Lal15g1274 820 Pfam E1-E2 ATPase 255 427 - -
Lal15g1274 820 MobiDBLite consensus disorder prediction 70 88 - -
Lal15g1274 820 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 29 808 - -
Lal15g1274 820 SFLD C1.7: P-type atpase like 429 729 - -
Lal15g1274 820 Gene3D - 458 608 IPR023299 GO:0000166
Lal15g1274 820 MobiDBLite consensus disorder prediction 58 89 - -
Lal15g1274 820 SUPERFAMILY Calcium ATPase, transduction domain A 255 340 IPR008250 -
Lal15g1274 820 PRINTS P-type cation-transporting ATPase superfamily signature 447 461 - -
Lal15g1274 820 PRINTS P-type cation-transporting ATPase superfamily signature 600 611 - -
Lal15g1274 820 PRINTS P-type cation-transporting ATPase superfamily signature 622 632 - -
Lal15g1274 820 PRINTS P-type cation-transporting ATPase superfamily signature 676 695 - -
Lal15g1274 820 PRINTS P-type cation-transporting ATPase superfamily signature 700 712 - -
Lal15g1274 820 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 255 474 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal15g1274 820 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 580 756 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal15g1274 820 ProSitePatterns E1-E2 ATPases phosphorylation site. 449 455 IPR018303 -
Lal15g1274 820 SUPERFAMILY HAD-like 445 776 IPR036412 -
Lal15g1274 820 CDD P-type_ATPase_HM 131 778 - -
Lal15g1274 820 Gene3D - 221 345 - -
Lal15g1274 820 SFLD p-type atpase 429 729 IPR044492 -
Lal15g1274 820 Pfam haloacid dehalogenase-like hydrolase 445 689 - -
Lal15g1274 820 Gene3D - 441 727 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1274 Lal-Chr15 14386003 14395135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1274 81 801 Primary Pumps ATPases AT4G37270 75.900 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1274 K01534 - gmx:100776309 1278.08