Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1259 ATGACCTTCATAAGGGATAATAATGAAGTAGATGATGAGATATCAACAAATAAAGAAGATATAAATGGTGGGTCACACTCATCAGAGACTCATGAAGATGCTAACTTAGGAGAATGGTTAAGTTTGGGCCTCAAAGGAGACAAGCATAATGAATCAGAAGCTGATCAAAACAACACAGATTCTAAATCAAAACCTCACAAAAACCATAAACTATTTTCATGCAACTTTTGCATGAGAAAGTTTTACAGTTCACAAGCCTTAGGTGGTCATCAAAATGCACACAAAAGAGAAAGAGGAGCAACAAGGAATTACCATTCTCATAAGATGATGATGATATCACTTAATAGGTCACTTGGAATCAAACCTCACTCTCTTGTGCATAAACCAAACCAAGAAAATTCTTCTATGGTGGCTAGATTCAATGATAACAATTCTGATAATGGAATGTTATGGACACCCTTTATGCATGTAGGTTCATTATGGCCAGGAAGCTTTAGAGTGGAATTACCAAAGCAAGAATCAGATATCAATAAGCTTGACTTAGATCTTCGGCTTTGA 558 0.3584 MTFIRDNNEVDDEISTNKEDINGGSHSSETHEDANLGEWLSLGLKGDKHNESEADQNNTDSKSKPHKNHKLFSCNFCMRKFYSSQALGGHQNAHKRERGATRNYHSHKMMMISLNRSLGIKPHSLVHKPNQENSSMVARFNDNNSDNGMLWTPFMHVGSLWPGSFRVELPKQESDINKLDLDLRL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1259 185 MobiDBLite consensus disorder prediction 1 35 - -
Lal15g1259 185 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 185 - -
Lal15g1259 185 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Lal15g1259 185 MobiDBLite consensus disorder prediction 1 33 - -
Lal15g1259 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Lal15g1259 185 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 185 - -
Lal15g1259 185 MobiDBLite consensus disorder prediction 48 67 - -
Lal15g1259 185 Gene3D Classic Zinc Finger 48 118 - -
Lal15g1259 185 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1259 Lal-Chr15 14226947 14227973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1259 55 176 C2H2 Transcription Factor Family AT1G24625 41.481 1.07e-20 83.6