Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1257 ATGGCTCTCACAGAACAACAATCCCAAGATTCACAACAACAAACTCCCTCAATCATTGATACCCTTTTCTGTGAAGAACAACACACCTTTGATGATGAAGAAGAAGATTTTTCTTCAAAGGGTGTTGATTTTGATACCAAAAACGATGATGGGTCTTCATTATCAGTGACAAAGTTTCAATCTTTGCCTTTGGTTTTGTTAGAGAATGACTTGTTCTGGGAACATGAAGAGCTTGTGTCCTTAATCTACAAAGAGAGAGAAACCCATTTGAACCATTTGATTTCTGATGGATCCTTAGAGGAACACCATGTTGAAGCTGTGAATTGGATTTCTAAAGTTTGTGCACATTTTGGGTTCTCTGCTTTGACCACTGTTCTTGCTGTGAATTATCTTGATAGGTTCATAAGAAACCTTAGGTTTCAGGATGATAAGCCATGGATGACACAGCTCACTGCTGTTGCTTGTTTGTCCATTGCTGCCAAAATGGAAGAGATCCATGTGCCACTCCTTTTGGAACTTCAAGTGGAGGAATCAAGTTTTGTGTTTGAAGCGAAGACAATACAGAGAATGGAGCTCATAGTGTTATCAGCTCTTAAATGGAGGATGAGTCCAGTGACCCCTATTTCCTACTTTGAACACATTGTCAGAAGGCTTGGTTTAAAGAGCTGCTTGCATCGGGAGTTTCTGTCGCGTTGTGAGCGAGTTCTTCTTAATGTCATTGCGGATTCAAGGGTTATGAGTTATCTTCCTTCTACGCTGGCTGCTGCAACGATGGTCCATGTTATCAAAGAGATTGTACCATTTAATGCAACTGAGTACATTGATCAAATAATGGGTTTACTCAAGATTAGAGAGGAACAAGTGAACCAGTGCCACAAACTCATACTGAAACTATTAGTTTGCAATGAAGGCATTCACAATCTTCACCCGAAACGCAAGTGCGTATCTGAACCAAGTAGCCCAGGTGGTGTCATTGATGCATCTTTCAGTTGTGACAGCTCAAATGATTCATGGATCAGTGCATCATCAGCCTCGCATTCACCGGAGCCACTGTTCAAGAGGAGGAAAGCTCAGGGCCAGCAGATGCAGTTGCCTTCTGTTAATCGTGTGTCTATCGATGTTCTTAATTTCCCTCATTAA 1140 0.414 MALTEQQSQDSQQQTPSIIDTLFCEEQHTFDDEEEDFSSKGVDFDTKNDDGSSLSVTKFQSLPLVLLENDLFWEHEELVSLIYKERETHLNHLISDGSLEEHHVEAVNWISKVCAHFGFSALTTVLAVNYLDRFIRNLRFQDDKPWMTQLTAVACLSIAAKMEEIHVPLLLELQVEESSFVFEAKTIQRMELIVLSALKWRMSPVTPISYFEHIVRRLGLKSCLHREFLSRCERVLLNVIADSRVMSYLPSTLAAATMVHVIKEIVPFNATEYIDQIMGLLKIREEQVNQCHKLILKLLVCNEGIHNLHPKRKCVSEPSSPGGVIDASFSCDSSNDSWISASSASHSPEPLFKRRKAQGQQMQLPSVNRVSIDVLNFPH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1257 379 SMART Cyclin_C_2 205 333 IPR004367 -
Lal15g1257 379 Pfam Cyclin, N-terminal domain 101 203 IPR006671 -
Lal15g1257 379 Gene3D - 204 293 - -
Lal15g1257 379 SMART cyclin_7 108 196 IPR013763 -
Lal15g1257 379 CDD CYCLIN 106 195 IPR013763 -
Lal15g1257 379 PANTHER CYCLINS 5 362 IPR039361 -
Lal15g1257 379 SUPERFAMILY Cyclin-like 73 202 IPR036915 -
Lal15g1257 379 Gene3D - 105 203 - -
Lal15g1257 379 Pfam Cyclin, C-terminal domain 205 313 IPR004367 -
Lal15g1257 379 PANTHER CYCLIN-D3-2 5 362 - -
Lal15g1257 379 SUPERFAMILY Cyclin-like 188 316 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1257 Lal-Chr15 14175067 14177312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1257 1 369 Core Cell Cycle Gene Families AT5G67260 49.206 3.27e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1257 K14505 - gmx:100785030 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0132 4 824655 826647 Lal15g1257 15 14175067 14177312 ECH
Lal21g0217 21 1428124 1430020 Lal15g1257 15 14175067 14177312 ECH
Lal15g1257 15 14175067 14177312 Lal15g1257 15 14175067 14177312 ECH
Lal16g0233 16 1397711 1399795 Lal15g1257 15 14175067 14177312 LSH
Lal15g1257 15 14175067 14177312 Lal23g0189 23 1672243 1674788 LSH
Lal15g1257 15 14175067 14177312 Lal12g0409 12 2906137 2908184 PCT
Lal15g1257 15 14175067 14177312 Lal13g0405 13 2535872 2538092 PCT
Lal15g1257 15 14175067 14177312 Lal24g0325 24 2308314 2310804 PCT
Lal15g1257 15 14175067 14177312 Lal16g0233 16 1397711 1399795 PCT
Lal15g1257 15 14175067 14177312 Lal15g1257 15 14175067 14177312 PCT
Lal15g1257 15 14175067 14177312 Lal23g0189 23 1672243 1674788 PCT
Lal23g0189 23 1672243 1674788 Lal15g1257 15 14175067 14177312 PCT