Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1244 ATGGCTGCCAATAATGAACAGGAAAAACAAAACGAGTTGGGGCACAAAGATCTTGCTCATAAGAGTCTCCTTCAGAGTGATGCACTTTTTCAGTATATACTTGAAACCAGTGTGTTTCCAAGAGAGCATGAAAGTTTAAAAGAACTACGTCAAATGACAGAAAAGCACCCTAGGAATCTCATGGCCACACCTGCTGATGAAGGACAATTTCTGAGCATGTTGCTTAAGCTCATCAATGCCAAGAACACAATTGAAATTGGTGTCTACACTGGTTACTCTCTGCTTTCCACTGCTCTAGCTATTCCCCATGATGGAAAGATTTTGGCTATGGATGTGAGCCGGGAATATTATGAACTGGGATTGCCCATAATTCAAAAAGCTGGAGTGGAACACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTCGATGAACTTCTTAAAGATGAAAAGAACAAAGAATCATTTGATTTTGTGTTTGTGGATGCTGACAAGAATAACTACTTAAACTACCACCAGAGGGTTATTGAACTTGTGAAGGTTGGGGGGCTGATCGGGTACGATAACACCCTATGGGGTGGATCTGTGGTTGCTCCACCAGATGCACCACTCATGGATTATATCAAGCATTATCGTGGTTATATATTAGACCTAAACAAATATCTTGCTAATGATTCCAGAATTGAGATTTGCCAGCTCCCAGTTGGTGATGGCATTACCCTTTGTCGTCGCCTCATTTGA 744 0.4167 MAANNEQEKQNELGHKDLAHKSLLQSDALFQYILETSVFPREHESLKELRQMTEKHPRNLMATPADEGQFLSMLLKLINAKNTIEIGVYTGYSLLSTALAIPHDGKILAMDVSREYYELGLPIIQKAGVEHKIDFREGPALPLLDELLKDEKNKESFDFVFVDADKNNYLNYHQRVIELVKVGGLIGYDNTLWGGSVVAPPDAPLMDYIKHYRGYILDLNKYLANDSRIEICQLPVGDGITLCRRLI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1244 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Lal15g1244 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Lal15g1244 247 Pfam O-methyltransferase 36 246 IPR002935 GO:0008171
Lal15g1244 247 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 246 - -
Lal15g1244 247 PANTHER O-METHYLTRANSFERASE-RELATED 2 246 - -
Lal15g1244 247 CDD AdoMet_MTases 84 186 - -
Lal15g1244 247 Gene3D Vaccinia Virus protein VP39 13 247 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1244 Lal-Chr15 13903911 13908323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1244 4 246 Monolignol Biosynthesis Gene Families AT4G34050 72.541 3.41e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1244 K00588 - gmx:100795858 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1244 15 13903911 13908323 Lal15g1244 15 13903911 13908323 ECH
Lal15g1244 15 13903911 13908323 Lal23g0195 23 1755728 1758892 LSH
Lal15g1244 15 13903911 13908323 Lal16g1384 16 10352821 10355585 LSH
Lal15g1244 15 13903911 13908323 Lal15g1244 15 13903911 13908323 PCT
Lal15g1244 15 13903911 13908323 Lal16g1384 16 10352821 10355585 PCT
Lal15g1244 15 13903911 13908323 Lal23g0195 23 1755728 1758892 PCT
Lal23g0195 23 1755728 1758892 Lal15g1244 15 13903911 13908323 PCT
Lal16g1384 16 10352821 10355585 Lal15g1244 15 13903911 13908323 PCT