Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1227 ATGCCCAATCATCCAACAACAACAACAAACATGAACGACCAACTATCAAAACAAACATCAATCTTCGGCCTCCGGTTATGGGTTGTTGTCGGTGTTTGTGTCGGAGCCGCCATTGTCCTTATCCTCGTTCTCATTTCCTTATGGCTCTCTTCCAAACGCTCCAAAACTAAAACCAAACACAATAATGATCTTACCATAATCCCAGACATTTCTAAAGAGATCCAAGAAATTAGAATAGACAATGCAAATCGACCTCCTAAAAAACCGGACCCATTTCCTGAACCGGACCCGGTTCACGGAATCGAACGCCAAGCCTTACTCACACTCCAACAAGAAGAAAACCACAACAACAATAACGCTAATAGTAATAGTAATAATGGGTTGTTGGGTTTTAACAGAATTCAGTTTGAGATTGGGAAGAACCATAGAATCTCGTACCCTGAACGTGGTTTTATGAGATCATCTTCGCAATTACAGAACGGGAGTGGAGAGGGTAGGACAGTGGATCAGGTTGCTACTGTGATCCCTGAAGTTTCGCATTTGGGTTGGGGTCATTGGTACACTCTCAGGGAGCTTGAAGATTCAACTGATGGGTTCGCCGATGAGAATGTTATTGGTGAAGGAGGGTATGGGATTGTTTACCATGGTGTTTTGAAGGATAATACTCATGTTGCTATCAAGAATTTGCTCAATAATAAGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTTGAAGCTATAGGAAGGGTTCGGCATAAGAATCTCGTAAGGTTGCTTGGCTATTGTGCTGAAGGGGCTCATAGAATGCTTGTGTATGAGTATGTTGACAATGGCAATTTAGAGCAGTGGCTGCATGGGGATGTCGGGCCTTGCAGTCCTCTAACTTGGGAAAATCGAATGAACATTATTCTGGGAACGGCCAAAGGGTTAACATATCTTCATGAGGGGCTAGAACCAAAGGTTGTACATCGCGATATTAAATCGAGCAACATTTTGATCGACAGGCAGTGGAATTCGAAGGTTTCAGACTTTGGCCTTGCAAAACTTCTTGGTTCTGATAGCAGCTATATCACAACCCGTGTAATGGGTACATTTGGGTATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAGCGAAGTGATGTGTATAGTTTTGGAATTCTTATTATGGAAGTAATTACTGGAAGGAATCCTGTTGATTATAGTCGGCCTCCAGAAGAGGTTAATTTAGTTGACTGGCTCAAAAAGATGGTTAGTAACAGAAATGCGGAGGGAGTGCTGGATCCCAAACTCGTTGAGAAACCAACTTCAAGGGCACTTAAGCGAGCTCTTCTTGTAGCTTTGCGCTGCACAGACCCTAATGCACAAAAGCGGCCTAAAATGGGACATGTCATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATTCAAGAGTCAAGAGGGATCCAGGACATTCACCTAACAATAGAGTATGTGATGGATTAAAAGAGGAGGCAACTGTTTCCGGTGATGAATGTAGTATTGAAACCAGTATGCAGGTTAATGAAACAAGATAA 1569 0.427 MPNHPTTTTNMNDQLSKQTSIFGLRLWVVVGVCVGAAIVLILVLISLWLSSKRSKTKTKHNNDLTIIPDISKEIQEIRIDNANRPPKKPDPFPEPDPVHGIERQALLTLQQEENHNNNNANSNSNNGLLGFNRIQFEIGKNHRISYPERGFMRSSSQLQNGSGEGRTVDQVATVIPEVSHLGWGHWYTLRELEDSTDGFADENVIGEGGYGIVYHGVLKDNTHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWENRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDRQWNSKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLVEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDSRVKRDPGHSPNNRVCDGLKEEATVSGDECSIETSMQVNETR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1227 522 Gene3D Transferase(Phosphotransferase) domain 1 275 486 - -
Lal15g1227 522 CDD STKc_IRAK 205 471 - -
Lal15g1227 522 SMART serkin_6 199 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1227 522 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524
Lal15g1227 522 Gene3D Phosphorylase Kinase; domain 1 173 274 - -
Lal15g1227 522 Pfam Protein kinase domain 200 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1227 522 SUPERFAMILY Protein kinase-like (PK-like) 176 471 IPR011009 -
Lal15g1227 522 ProSiteProfiles Protein kinase domain profile. 199 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1227 522 MobiDBLite consensus disorder prediction 472 491 - -
Lal15g1227 522 MobiDBLite consensus disorder prediction 472 522 - -
Lal15g1227 522 PANTHER OS01G0323000 PROTEIN 6 517 - -
Lal15g1227 522 PANTHER RECEPTOR-LIKE KINASE PLANT 6 517 - -
Lal15g1227 522 MobiDBLite consensus disorder prediction 508 522 - -
Lal15g1227 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1227 Lal-Chr15 13677074 13681502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1227 136 473 Trihelix Transcription Factor Family AT1G70460 43.714 1.34e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal15g1227 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1227 - - lang:109350106 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1227 15 13677074 13681502 Lal15g1227 15 13677074 13681502 ECH