Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1093 ATGATATTTGGTTGTTCAGGTGCAGATACTTATTACTCATCAATTCAATTATTGAACTGTGGTAACAAAGTATGTGAAGATGTTGATGAGCAAGATCTTATTAACATGGAAATAGCAACACCTTCGTTTTCTTCACACTCAAAGACAAATCAATTTCATTCATCTTCTAATTCTATGTCCCAAGATTACAACCAAGGAATCTTCAACTTCTCGAATAAGTTCAAGAGATCCACTTCCATAACCCACCAACAACATGAACAACAACCACCACAACCACCATTAGTTGTTGGCATAGAAGAAGTATCTGGAGGTGTCCCGGTTTACGAGACTCCCGGGATGTTATCGGAGATGTTCAATTTCCCTTCTCATGCCGGAGCTACGGCAACGGCCACTGAAATATTGGAGCAGCAACAACAGCAAATGACGGCGATGTTTCGTTCCACCACAAAGCCACCACCACCAGTGGTCAGTGACTGGTACGGAAACAGACAAGGGATGGTAACTGGGTTGGGAGATTCAAATAATCATCTGAACCGTGAGAGTAATGATAATAATAATACTATAGTTCATCATCATCATCATTATCAGAACAACCAAGAACACCATCATCAACAACAACAGATGTTAAACACAAATGCAGATTCAGCAGCTTCCATGCAACTTTTTCTCATGAACCCACCACAAGCAAGATCCCCTTCTCCACCTCCTAGAACTACTCACTCATCCACACTTCACATGTTACTTCCCAGTACTTCCCTACAAGGCTTCCCTGCTGGTAATTCTGGAGGAGGATCTTTTGGTCAATTCACATGGGTTCCTAATGGTGGTTCTCAAGATGGAGGCACAACTAGCACCAACAATGAAATTGGAGGAGGTGCTGTTGAAGGCCAAGGTCTTTCTTTGTCTTTATCATCTTCTTTGCAGCACTTAGAAGAGGCCAAATCCGAAGAATTAAGAATGGGGGAGAGTGGATTTATGTATTACAATCAAGGAGGTGGAGGTCCTTCTTCTGCTACTCATTATCATTACCAGAATCTCGGTATTCATCATCTCCAACCAGAACTTAATATACAAGGAGGTTTAGGACAAAGCCATCAAGGACATGTTTTATTTGGGTCCTCATCTTATTCATCGTTAGGTTCAGTTAATGTGCTGAGGAATTCAATCTATGCCAATGCTGCTCAACAATTATTAGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTGCAAGAAGAACAAGTTCAAGAGGCAGCTCTCAAACCCTAATTCGAATCCTGGTGGTGGAAGTAGTGGTGCTGGTGCTGCTTCTTCATCTTCATCAAAAGATTTTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGAAGGAAGGTAGACCGGAGATACAGCCACTACTGCGAACAAATGCATAATATTGTGAACTCATTCGACATGGTGATGGGTTCGGGGGCTGCAGTTCCATACACAGAACTTGCGAAGAAAGCAATGTCTCGCCATTTCCGGTGTCTAAAGGATGCAATAACAGTGCAGCTGAAGAATAGTTGTGAGGTTTTGGGAGAGAAAGATGGTGGTGGGATTTCAGGTGTGACAAAAGGAGAGACACCAAGGTTGAAGCTTCTTGAACAAAGCCTAAGACAGCAGAGAGCGTTTCAGCAGATGGGGATGATGGAACAGGAAGCTTGGAGGCCCCAGAGAGGGTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTTGAGCATTTCCTTCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGTCACGACAGACTGGGCTATCAAGAAATCAGGTATCAAACTGGTTCATCAATGCCAGGGTTCGTTTGTGGAAACCCATGGTAGAAGATATGTACCAACAAGAACTTAAGGAAGCAGAAGGTAGTGCAGAAGAGAGAGAAAATAACAACGAAAGCAGCAGCAATATCAGTGGCCACCAAGCACAAACTCCAACAACAGCACCGCCAACAACAATAACATCAACAGAAACAGGCAAAAGATCCAATATCAATATCACTGAAAACGACCCTTCATTGACAGCAATTAATAGACATGGCGTCTCGGAAAACCAAGCAACTAGGCATTCCATTTCTACCACCACCGCTGAGGTGGCGCCACCGTTATTGGAGTCAGACCTGCCACCACATAATAGATCAGTGCCCACCGATGACACGTGTCAGCATAACAGCTTGGTTACAGCGGAATATGGGACCGCTAATTCTGGTGGTTCTGAAATTCGTTCTACTCTCATAAGGTTTGGGACCACGACCGGTGATGTGTCACTTACCCTAGGGCTACGCCATGCTGGGAACATGCCCGAAAGAAGCCCTTTTATTAGGGACTTTGGTGGCATTTAA 2385 0.4403 MIFGCSGADTYYSSIQLLNCGNKVCEDVDEQDLINMEIATPSFSSHSKTNQFHSSSNSMSQDYNQGIFNFSNKFKRSTSITHQQHEQQPPQPPLVVGIEEVSGGVPVYETPGMLSEMFNFPSHAGATATATEILEQQQQQMTAMFRSTTKPPPPVVSDWYGNRQGMVTGLGDSNNHLNRESNDNNNTIVHHHHHYQNNQEHHHQQQQMLNTNADSAASMQLFLMNPPQARSPSPPPRTTHSSTLHMLLPSTSLQGFPAGNSGGGSFGQFTWVPNGGSQDGGTTSTNNEIGGGAVEGQGLSLSLSSSLQHLEEAKSEELRMGESGFMYYNQGGGGPSSATHYHYQNLGIHHLQPELNIQGGLGQSHQGHVLFGSSSYSSLGSVNVLRNSIYANAAQQLLEEFCSVGRGQCKKNKFKRQLSNPNSNPGGGSSGAGAASSSSSKDFPPLSAADRIEHQRRKVDRRYSHYCEQMHNIVNSFDMVMGSGAAVPYTELAKKAMSRHFRCLKDAITVQLKNSCEVLGEKDGGGISGVTKGETPRLKLLEQSLRQQRAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLSRQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGSAEERENNNESSSNISGHQAQTPTTAPPTTITSTETGKRSNINITENDPSLTAINRHGVSENQATRHSISTTTAEVAPPLLESDLPPHNRSVPTDDTCQHNSLVTAEYGTANSGGSEIRSTLIRFGTTTGDVSLTLGLRHAGNMPERSPFIRDFGGI 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1093 794 MobiDBLite consensus disorder prediction 415 444 - -
Lal15g1093 794 MobiDBLite consensus disorder prediction 644 690 - -
Lal15g1093 794 SMART prehox3 379 510 IPR006563 -
Lal15g1093 794 CDD homeodomain 562 623 IPR001356 GO:0003677
Lal15g1093 794 Gene3D - 565 627 - -
Lal15g1093 794 ProSiteProfiles 'Homeobox' domain profile. 559 622 IPR001356 GO:0003677
Lal15g1093 794 Pfam Homeobox KN domain 579 618 IPR008422 GO:0003677|GO:0006355
Lal15g1093 794 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 97 783 - -
Lal15g1093 794 Coils Coil 625 645 - -
Lal15g1093 794 MobiDBLite consensus disorder prediction 632 690 - -
Lal15g1093 794 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 97 783 - -
Lal15g1093 794 SUPERFAMILY Homeodomain-like 564 629 IPR009057 -
Lal15g1093 794 MobiDBLite consensus disorder prediction 415 455 - -
Lal15g1093 794 SMART HOX_1 562 626 IPR001356 GO:0003677
Lal15g1093 794 Pfam Associated with HOX 384 509 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1093 Lal-Chr15 9467215 9477223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1093 379 794 Homeobox Transcription Factor Family AT2G23760 50.499 5.16e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal15g1093 POX 2.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1093 - - gmx:100807143 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0191 16 1155619 1163024 Lal15g1093 15 9467215 9477223 PCT
Lal23g1376 23 14437334 14445938 Lal15g1093 15 9467215 9477223 PCT
Lal15g1093 15 9467215 9477223 Lal16g0191 16 1155619 1163024 PCT
Lal15g1093 15 9467215 9477223 Lal23g1376 23 14437334 14445938 PCT