Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1067 ATGGAGTTGAGCTTGGATCTTAGTTTGGCCTTTGTCCCAAGAACCATTTCTGAGCTTCTTAGTAATGTTTCTGCTGAAATCAAAGATGGGTCTTACAAAATGGCTATGCTTGATGACTATGTCAAAAGTTTGGAAGATGAAATGAGAAAAATTGAGGCCTTCAAACGTGAGCTTCCTCATTGCATGCTTCTAGTAAACCAAGCTATAGCTATATTGAAGGAGGAAATAGACCATTGTATGAAAATGCAAAATGAAACTGTTGAAGATTTCATGCCACTGAAAGTGAAATATGATTCTGGAGGAAAAGGGTCATTGACTATTGGGAATGAAACTTTTGACAAAAAGAGCTGGATGAGTTCTGTTCAGTTATGGAGTGGTGAAAGTGAAACCAAATTGAGGAATGAAGAAGAAGAAGGGTCTGTGCCAAAGAACAAGGCCAACAATGAAGTAGCATTTATAGCTTTCAATGGAAACTCATCAATCCAAAAAACAGTTATGAAGAGGGATAACAAGGAGGTTTCAGTTTCACAGGCTCCTAGGCTTAGTTTGATGACTACAATGTTTGAAATAAATCATGAGAACTCCAACATTGGTTGTGGAGGAAGTTCTGATTCTTCTTTTGTTACAAGCCTGGTTGAGATAAAGGGTAGACAACCACAACCTCAACAGAATCCAAGAAAACAAAGGCGATGCTGGTCTAAAGAGCTTCATCGACGTTTTGTTGATGCACTTCAACAACTTGGTGGAACACAAGTGGCCACTCCAAAGCAGATTAGAGAACTGATGCAGGTGGAAGGCCTGACAAATGATGAAGTGAAGAGCCATTTGCAAAAGTACAGGCTTCATGTTAAAAGACAACCAGTTTCTTCAGTTGGCCAAGCTAATAATGATTTATGGATGGCACAAAATGAATATGGAGAAAAATCAAAGGGAAACTTATCATCACAGTCTGGTTCCCCACAAGGTCCTCTCACTCTAAGAGGGTATGCAAAAGGTCTTTCTAGCTCTGGATTCAACAGTTTGGATGCAGAAGAAGATGTACAATCAGATTGCCACAGTTGGAAAACTGGACTGCACCAATATCCAGAATATGATGCATTGTGA 1104 0.3949 MELSLDLSLAFVPRTISELLSNVSAEIKDGSYKMAMLDDYVKSLEDEMRKIEAFKRELPHCMLLVNQAIAILKEEIDHCMKMQNETVEDFMPLKVKYDSGGKGSLTIGNETFDKKSWMSSVQLWSGESETKLRNEEEEGSVPKNKANNEVAFIAFNGNSSIQKTVMKRDNKEVSVSQAPRLSLMTTMFEINHENSNIGCGGSSDSSFVTSLVEIKGRQPQPQQNPRKQRRCWSKELHRRFVDALQQLGGTQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVKRQPVSSVGQANNDLWMAQNEYGEKSKGNLSSQSGSPQGPLTLRGYAKGLSSSGFNSLDAEEDVQSDCHSWKTGLHQYPEYDAL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1067 367 Pfam Myb-like DNA-binding domain 229 280 IPR001005 -
Lal15g1067 367 Coils Coil 37 57 - -
Lal15g1067 367 Gene3D - 226 283 - -
Lal15g1067 367 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 359 - -
Lal15g1067 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 284 IPR017930 -
Lal15g1067 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 359 IPR044787 GO:0003700|GO:0006355
Lal15g1067 367 SUPERFAMILY Homeodomain-like 225 285 IPR009057 -
Lal15g1067 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 227 282 IPR006447 GO:0003677
Lal15g1067 367 MobiDBLite consensus disorder prediction 308 323 - -
Lal15g1067 367 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1067 Lal-Chr15 9023288 9026093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1067 1 285 G2-like Transcription Factor Family AT2G03500 37.459 9.07e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal15g1067 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1067 - - lang:109332341 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1067 15 9023288 9026093 Lal16g0720 16 4650657 4653724 PCT
Lal15g1067 15 9023288 9026093 Lal15g0686 15 4748482 4752311 PCT