Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1022 ATGGGAGAAGGTGAGAGTGTTGATTATCCTCCAAAGAATGTATCATCTTCTGATGCTGCACCTGCACTCGATGTTCCCGCCAAGAAGCTGGCGAGGCAGCTCAATTTTACGGTCTCCGGCGGTTCCATGCCGCTTCCAGAACAAGAAAAACGGCCCCAGAAGCTTCTGTTACAAGTTGGTATGGCACAGAGTCAGTTGAACCTTCAGTCACAGCCACCTCAGCCTCAGACACTGGCACACTCAGTGATTTCTACGCTGCAGACACCTCATCCTTCATTCAGGGTTGGGAAACCGGAATCTCCAAAAGCAAGATCAAGACCCAACTTTGAAAGTAAAGATGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGCAAACACTCAAAATGCTTAAAGCTATATTGTGAATGTTTTGTATCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTATAACAATGTTGAAAATGAAGCTGCCAGACGAGAAGCTGTTGAAGCTACTTTGGAACGCAATCCAAATGCATTTAGACCAAAAATTGCGAGCAGCCCTCATGGGACACATGATAGAAGGGAGGAGGTTGGGGAAGTTTTAATATTGGGGAAGCATAGCAAGGGGTGCCATTGTAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCGACATTCTTTGCTCTGAAAATTGTAAATGCATGTACTGCAAGAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTGTTCCATGGAGATCAAAATAACATGGTGTATATTCAGCAGGCAGCAAATGCCGCCATAACTGGAGCTGTTGGTTCGTCTGGTTTTTCATCACCACCTGTTTCAAAGAAAAGAAAAGGTCAGGAACTCTACTTTGGGGCTACAACAACAAAGGATTCATCTATTGGCAGGCTGGGACAACAGGCAAACCACGTTAGGAGTCCTGCACCCTCCTCATCCTTTTCTCCTATACCATGTGCTCGTGTTGGAACTTCAACAGTAGGTCTTTCAAAACTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTTAAGGAACTTTGCTCGGTTCTGGTGCTTGTATCTGTACAAGCTGCAAAGACACTGACAGACCAGAAAATTTTAATGGACAAGCATGCAGAAGATCGGCCGGTAACTTCCCATGCTTTTTCAACTCAAGAGCAATTACCAAGCCAAAAGGAAGCCGATGATTGTTCGAAAGCAAACCAAACAGATAAAATCAGCCCGGATAGTTCCTGTTCTGATGGTGCTAATGCCCCGAAAGGGAGGTCAATGTCTCCTGGAACTTTAGCATTAATGTGTAATGAGGAAGATACAATGTTTGTGACTACTGCCTCCTCTATTGGGTCAATGGCCCATGCTTGCAACACATCTTCACAATTTCCTTATGGACAAGGAATGACAGATGTCTACGCAGAGCAAGAAAGGATTGTCTTGACGAAGTTTAGAGATTTTCTTAACAGGAGTCTAAAGGATCCAATCATCAATGGCACCGGAAATGCCAGTGCTGAGACAACACAACAGCAGAAAGCTGCTAGTAATGGTGTTGTCAAAGCTCTTGTTCAACCCATGGCAACAAGTATGGGCAAGACACCCACATCTTTGGTTGCTAATAATGTTCCTGAAAATGGGGAAATTAAGCTGAAAAAATAA 1686 0.4371 MGEGESVDYPPKNVSSSDAAPALDVPAKKLARQLNFTVSGGSMPLPEQEKRPQKLLLQVGMAQSQLNLQSQPPQPQTLAHSVISTLQTPHPSFRVGKPESPKARSRPNFESKDGTPKKQKQCNCKHSKCLKLYCECFVSGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTHDRREEVGEVLILGKHSKGCHCKKSGCLKKYCECFQADILCSENCKCMYCKNFEGSEERQALFHGDQNNMVYIQQAANAAITGAVGSSGFSSPPVSKKRKGQELYFGATTTKDSSIGRLGQQANHVRSPAPSSSFSPIPCARVGTSTVGLSKLMYRSLLADIIQPQHLKELCSVLVLVSVQAAKTLTDQKILMDKHAEDRPVTSHAFSTQEQLPSQKEADDCSKANQTDKISPDSSCSDGANAPKGRSMSPGTLALMCNEEDTMFVTTASSIGSMAHACNTSSQFPYGQGMTDVYAEQERIVLTKFRDFLNRSLKDPIINGTGNASAETTQQQKAASNGVVKALVQPMATSMGKTPTSLVANNVPENGEIKLKK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1022 561 MobiDBLite consensus disorder prediction 541 561 - -
Lal15g1022 561 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 205 239 IPR005172 -
Lal15g1022 561 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 119 154 IPR005172 -
Lal15g1022 561 SMART CXC_2 117 157 IPR033467 -
Lal15g1022 561 SMART CXC_2 202 243 IPR033467 -
Lal15g1022 561 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 87 539 - -
Lal15g1022 561 MobiDBLite consensus disorder prediction 415 430 - -
Lal15g1022 561 PANTHER TESMIN/TSO1-RELATED 87 539 IPR028307 -
Lal15g1022 561 MobiDBLite consensus disorder prediction 88 120 - -
Lal15g1022 561 MobiDBLite consensus disorder prediction 384 437 - -
Lal15g1022 561 ProSiteProfiles CRC domain profile. 118 242 IPR005172 -
Lal15g1022 561 Coils Coil 152 172 - -
Lal15g1022 561 MobiDBLite consensus disorder prediction 97 120 - -
Lal15g1022 561 MobiDBLite consensus disorder prediction 1 21 - -
Lal15g1022 561 MobiDBLite consensus disorder prediction 390 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1022 Lal-Chr15 8303632 8314906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1022 1 501 CPP Transcription Factor Family AT4G29000 53.333 4.07e-173 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lal15g1022 TCR 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1022 - - gmx:100818116 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1022 15 8303632 8314906 Lal15g1022 15 8303632 8314906 ECH