Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1009 ATGCTACATCAAAGGTTGTTGAATAAAGCTGGAGTGAAAAACCATGCATTGGAAAATGGCAAAGAAGCCATAGACATTCATTGCTCTGCTCAAAGTTTTGACATGATTCTCATGGACAAAGATATGCCTATCATGAATGGAATTGAGGAAACAAATAAGCTTAGATCAATGGGTATTGGTAGCATGATTGTTGGTGTATCATCATCCTCGAAGGAAGAAGAAATAAGAGAGTTTATGGAAAAAAAAAAAATATTGGAGTCAAGTCAACTAAATCAACCCAACACCTTGCTTAACACAAAACATGATGTAACATACTCTAGCCTCAAATCCAGCCAACATGACCCATCAGCCTATCGTGACCGAGACAACACGGTCAACAGGCCTAGACATGACCCAGACACTTTGGCCAAGACGGCAAGCCACAACTTAGACAGCATTGGTTGGCCTGCTGACCGTGCTGTCTAA 465 0.4108 MLHQRLLNKAGVKNHALENGKEAIDIHCSAQSFDMILMDKDMPIMNGIEETNKLRSMGIGSMIVGVSSSSKEEEIREFMEKKKILESSQLNQPNTLLNTKHDVTYSSLKSSQHDPSAYRDRDNTVNRPRHDPDTLAKTASHNLDSIGWPADRAV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1009 154 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 81 - -
Lal15g1009 154 CDD REC_hyHK_CKI1_RcsC-like 1 80 - -
Lal15g1009 154 SUPERFAMILY CheY-like 2 80 IPR011006 -
Lal15g1009 154 MobiDBLite consensus disorder prediction 90 154 - -
Lal15g1009 154 Pfam Response regulator receiver domain 3 80 IPR001789 GO:0000160
Lal15g1009 154 Gene3D - 1 84 - -
Lal15g1009 154 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 2 81 - -
Lal15g1009 154 MobiDBLite consensus disorder prediction 90 113 - -
Lal15g1009 154 MobiDBLite consensus disorder prediction 114 137 - -
Lal15g1009 154 ProSiteProfiles Response regulatory domain profile. 1 101 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1009 Lal-Chr15 8148635 8149535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1009 2 80 Response Regulator Gene Family AT3G04280 45.679 1.71e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal15g1009 Response_reg 1.4e-10 CL0304