Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0995 ATGAAAATGAGTTCTATTAGGAAAATCCGAATTATATATACTGACCCAGATGCAACCGATTATTCAAGTGATGAAGAAGTAAAGAAAGTTCATTTTCAATTAGATAGTCAGAATCGTTTTTTCAAGGAAATTTTGCTCCCAAAACCAAGTCCTAAAATTTCTCTTGTACGTGGAAAAGTGACACCAAAGTCAACCAGCATTTATAAAGGTGTTAGACTTAGGAGATGGGGAAGGTTTTCAGCTGAGATTAGAGACCCAATTCGCAAGGTTAAAGTGTGGATTGGTACTTTTGATACTGAACTTGAAGCTGCTGAGGCATATGCCAAAAAGCAGAATGAGTTCAAGGAGGCTCTACAAAGTGGGAATGCAACTAATTCAAAGGTTACAAAAAAGTTACGTTCAAAGCAAAAAAAGAAGCATAAAAAAGTGTCTGTTCATTCACCCCAATCATCTTTGTTTGCTCCTTCTGCTATTGAAGGTTCACAAGGAGAAAATTGTAACATCATTGGCCAGGGAGATTCCCTATCTAGAGACACTGCAGAACGGTGCAATGTTGTTTAG 561 0.3743 MKMSSIRKIRIIYTDPDATDYSSDEEVKKVHFQLDSQNRFFKEILLPKPSPKISLVRGKVTPKSTSIYKGVRLRRWGRFSAEIRDPIRKVKVWIGTFDTELEAAEAYAKKQNEFKEALQSGNATNSKVTKKLRSKQKKKHKKVSVHSPQSSLFAPSAIEGSQGENCNIIGQGDSLSRDTAERCNVV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0995 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2-LIKE 6 163 - -
Lal15g0995 186 CDD AP2 66 107 IPR001471 GO:0003700|GO:0006355
Lal15g0995 186 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Lal15g0995 186 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Lal15g0995 186 MobiDBLite consensus disorder prediction 130 145 - -
Lal15g0995 186 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Lal15g0995 186 MobiDBLite consensus disorder prediction 119 157 - -
Lal15g0995 186 ProSiteProfiles AP2/ERF domain profile. 67 127 IPR001471 GO:0003700|GO:0006355
Lal15g0995 186 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 163 - -
Lal15g0995 186 Gene3D AP2/ERF domain 67 126 IPR036955 GO:0003700|GO:0006355
Lal15g0995 186 SUPERFAMILY DNA-binding domain 66 115 IPR016177 GO:0003677
Lal15g0995 186 Pfam AP2 domain 67 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0995 Lal-Chr15 7966744 7967416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0995 6 127 AP2-EREBP Transcription Factor Family AT1G68550 40.714 6.27e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal15g0995 AP2 2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0995 - - lang:109341685 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0995 15 7966744 7967416 Lal15g0995 15 7966744 7967416 ECH