Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0994 ATGAGTTCTATTAGGAAAATCTGGATTATATATACTGACCCAGATGCAACCGATTATTCAAGTGATGAAGAAGTAACGAAAGTTCATTTTCAATTAGATGGTCAGAATCGGTTTTTCAAGGAAATTTTGCTCCCAAAACTAAGTCCTCAAATTTATCCTGAACGTGGAAAAATAACGCCTAAGTCAACCAGCATTTATAAAGGTGTTAGACTTAGGAGATGGGGAAGGTTTTCAGCTGAGATTAGAGACCCAATTCGTAAGGTTAAAGTGTGGATTAGTACTTTTGATACTGAACTTGAAGCTGCTGAAGCATATGTCAAAAAGTAG 327 0.3609 MSSIRKIWIIYTDPDATDYSSDEEVTKVHFQLDGQNRFFKEILLPKLSPQIYPERGKITPKSTSIYKGVRLRRWGRFSAEIRDPIRKVKVWISTFDTELEAAEAYVKK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0994 108 SMART rav1_2 65 108 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 CDD AP2 64 105 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 ProSiteProfiles AP2/ERF domain profile. 65 108 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 Pfam AP2 domain 65 106 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 SUPERFAMILY DNA-binding domain 64 106 IPR016177 GO:0003677
Lal15g0994 108 Gene3D AP2/ERF domain 65 108 IPR036955 GO:0003700|GO:0006355
Lal15g0994 108 PIRSF PTI6 1 108 IPR017392 GO:0003700
Lal15g0994 108 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Lal15g0994 108 PANTHER OS01G0224100 PROTEIN 4 106 - -
Lal15g0994 108 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0994 Lal-Chr15 7963147 7963473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0994 4 108 AP2-EREBP Transcription Factor Family AT1G68550 40.496 6.55e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal15g0994 AP2 4.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0994 - - lang:109341579 174.481