Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0989 ATGAAATCACGATCTGATTTGCACATTGTCGCACCCAGACAGCCGGATAGCCCAAATGCTATTTCTAATGGAATTAAACCATTTAATACAAATGGGCACTTAGCATCACCTCGTGGAGAGGTTGAAGCCAAACATCGATTCTATTTGGTTCAGTGGTTAACTAGTCTTCTTCCTTCATTGGATTTACCACTAAATGCCACGGATGATGACTTAAGAGCATGCTTGAGCGATGGTATAGTCTTGTTGCAACTACTGAACAAGCTAAGACCAGGTTCTGTGAATGTGGTTAGTGAACCTGATGATTCTCTGCCATCAGAATCAGGAAATGTTAGAACTTTTCTGAAAGCTTTGGATGGATGGGGAGTGCCCAAATTTGAAGCATCAGACCTGGAGAAGGGATCAATGAAGGCTATTGTGGACTGTCTTTTAACACTTAGAGCAAAAAGTTTGCAGAATCCTTTGTTAGAAAATCTTTCTTTCAACGTAGGGAGCCCTCGGTGGAATGCAACTGAGTCGAAGTTTCAACGTATTCCGAGTAGTCCACATTCAGGAGATATATCTCCTTCGTTAATGCACCATGTTGGTCATAAGTTCCATGAGGTGTTTCAACTGAAACCGGGAAGCTATACAGATCTTCCTGCTGCAAAAATATCAGAAATGATGAAATCAGTCAGTTTAGATAATGCTCCCACTCAGTCACTTCTGAGTGTCGTGAATGGCATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGTGAACTACCTCATCGCGTGGCTTGCTTGTTGAGAAAAGTTTCACAGGAAATTGAGCGGCGCATATCAACTCAAGCGGAACATTTAAGAACTCAAAACAATCTTTTTAAGGTTCGAGAAGAAAAATATCAATCGAGAATAAGAGTACTAGAGGCACTTGCATCTGGAACTAGAGAAGAGAGTGAGATTATTGCTAGCCAGCTTCAGCATTTGAGGAGGACTGAGAAGAGCAAAGAAGAAGAAAAGAAGGTAGATGTAGATGTTATTAGGTTGACGAAAGAGCAGGAGGACAATGATATCAAAATTGCAGCATTGAAGCAAGAACTTGAAACTACTAAAAAAGCAAATGAAGTACTATGCTTACAGTTGGAGGCAGAAGCCAAGGGTGCTGAAGAAGAACTGAAACAGGTGTCTCAAGAATATGAGCATCGATTGGAAGAATTAAGAACAAAGGTTAATGAGCTTGAGGCTTCTTCTGATTCGAAGTATCAGAAGTGGAACAAGAAAAATTACCAATTACAGACTGCTTTGAATTTTCACTGTAATTCCATGCAGAAATTGAAATCATCTTGGGAATCCATCAAGCAAGATGTTATGAAGGGAAAAAAGGTTTATGCAGAGGAATGTAATCAATTAGGTATGAATCTTAAATCACTGGTCCATGCAGCTGAGAACTATCAAGTTGTTCTTGCTGAAAACCGGAAACTGTTTAATGAAGTTCAAGAATTAAAAGGAAATATCAGAGTATATTGTCGAATTAGACCATTTCTTCCGGGACAAAAAGAAAAACAATCTATTGTGGAACACATTGGTGAAAGTGATTTACATGTGGCAAATCCCTCCAAACAAGGGAAAGATGCTCTAAAATCATTCAAGTTTAATAAGGTTTTCAGCCCTGCCTCAACCCAAGTGGATGTATATTCTGATATCCAACCATTTATAAGATCAGTACTGGACGGGTATAATGTATGTATATTTGCATATGGTCAAACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAACTGGAGCATCAGGTGAAGACATTGGTGTTAATTATCGAGCTCTGAATGACCTCTTCAGTATTTCCACAAATAGAACAAACTCCATAGACTATGCTATTGGGGTTCAAATGGTTGAAATATATAATGAACAAGTCCGGGATTTGTTATCAACTGATGTTTCTACCAAAAAATATCCTTTGTCAACAACTTTGGACAGTTTATTCTTTGTTATGTATTTTCTAGTTATTTTGTTTAGATGGGTCATGTTATGTTTTGATTTCCTTTATTTGCACACACTTGGGATATTGACTCACTCTCAGCCTAAGGGTTTAGCAGTACCTGATGCTACTTTGTACCCAGTTAAATCACCTTCAGATGTCATTATGTTAATGGACATTGGACTTAAAAACAGAGCCATCAGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCAAGTTCATGGGAAGGATTTGAGTTCTGGTTCTACTATGTTTGGTAATCTTCATTTAGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGTGATCGACTTAAAGAAGCTCAACATATAAACAAGTCATTATCTGCCCTTGGAGATGTTATTTTTGCCTTGTCTCAAAAGAGCTCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTGTCCAAATTAATTCAGATACAAATTCATTTTCTGAAAGTTTGAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGGATTGAGTTAGGAGTTGCACGAAGTAGCAAAGAGGGTAAAGATGTCAGAGAATTAATGGAACAGATGGCTTCTATGAAGAACATTATTTTAAAAAAAGATGAGGAGATTGAGAGACTACAAAAAGGTTCAATGGGTGCTCTTAAGCAAAAACCATCAAGTGGAAGTAATAAGCATCTTGAAGCTGATATCCAGCAACCAATGGATGATCATAGACACCAAAATGAATTCCACAATCAATCTGAAATTGCTGGGAAAGTAATAGGTCAGACTATTGCTGGAGCAGATGCAGATTTTGATGAAAGATTAAATGAAATATTTGACAATGGCCATGTTACAGGCACAGACAGTGATGGTTCTGAAGATTTTGATGGCACAAAATTATCAGTTAAGGTGGCTCAAAGCACAAAATCATCAGATAAGATGGAGAAATTTAAAGCAATTCCCAAAACTGGTCAAGTGGCGCGGAAATTAGGCCGAACCCCATCAACCACCACTTCTACAGTAAAGGATTCTGCGAAGCCATCGCCGGGTAAGTGA 3108 0.3867 MKSRSDLHIVAPRQPDSPNAISNGIKPFNTNGHLASPRGEVEAKHRFYLVQWLTSLLPSLDLPLNATDDDLRACLSDGIVLLQLLNKLRPGSVNVVSEPDDSLPSESGNVRTFLKALDGWGVPKFEASDLEKGSMKAIVDCLLTLRAKSLQNPLLENLSFNVGSPRWNATESKFQRIPSSPHSGDISPSLMHHVGHKFHEVFQLKPGSYTDLPAAKISEMMKSVSLDNAPTQSLLSVVNGILEESVERRNGELPHRVACLLRKVSQEIERRISTQAEHLRTQNNLFKVREEKYQSRIRVLEALASGTREESEIIASQLQHLRRTEKSKEEEKKVDVDVIRLTKEQEDNDIKIAALKQELETTKKANEVLCLQLEAEAKGAEEELKQVSQEYEHRLEELRTKVNELEASSDSKYQKWNKKNYQLQTALNFHCNSMQKLKSSWESIKQDVMKGKKVYAEECNQLGMNLKSLVHAAENYQVVLAENRKLFNEVQELKGNIRVYCRIRPFLPGQKEKQSIVEHIGESDLHVANPSKQGKDALKSFKFNKVFSPASTQVDVYSDIQPFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPTGASGEDIGVNYRALNDLFSISTNRTNSIDYAIGVQMVEIYNEQVRDLLSTDVSTKKYPLSTTLDSLFFVMYFLVILFRWVMLCFDFLYLHTLGILTHSQPKGLAVPDATLYPVKSPSDVIMLMDIGLKNRAISATAMNERSSRSHSVVSIQVHGKDLSSGSTMFGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDTNSFSESLSTLKFAERVSGIELGVARSSKEGKDVRELMEQMASMKNIILKKDEEIERLQKGSMGALKQKPSSGSNKHLEADIQQPMDDHRHQNEFHNQSEIAGKVIGQTIAGADADFDERLNEIFDNGHVTGTDSDGSEDFDGTKLSVKVAQSTKSSDKMEKFKAIPKTGQVARKLGRTPSTTTSTVKDSAKPSPGK 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0989 1035 Gene3D - 335 374 - -
Lal15g0989 1035 ProSiteProfiles Calponin homology (CH) domain profile. 43 150 IPR001715 GO:0005515
Lal15g0989 1035 Pfam Calponin homology (CH) domain 48 146 IPR001715 GO:0005515
Lal15g0989 1035 MobiDBLite consensus disorder prediction 1 20 - -
Lal15g0989 1035 SUPERFAMILY Calponin-homology domain, CH-domain 43 146 IPR036872 -
Lal15g0989 1035 ProSiteProfiles Kinesin motor domain profile. 496 858 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 895 IPR027417 -
Lal15g0989 1035 MobiDBLite consensus disorder prediction 1013 1029 - -
Lal15g0989 1035 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 340 649 - -
Lal15g0989 1035 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 678 1034 - -
Lal15g0989 1035 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 3 332 - -
Lal15g0989 1035 SMART kinesin_4 494 866 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 Gene3D Kinesin motor domain 438 860 IPR036961 -
Lal15g0989 1035 Gene3D - 38 150 IPR036872 -
Lal15g0989 1035 Coils Coil 352 415 - -
Lal15g0989 1035 PRINTS Kinesin heavy chain signature 570 591 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 PRINTS Kinesin heavy chain signature 728 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 PRINTS Kinesin heavy chain signature 759 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 PRINTS Kinesin heavy chain signature 808 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 MobiDBLite consensus disorder prediction 990 1035 - -
Lal15g0989 1035 Pfam Kinesin motor domain 502 857 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0989 1035 Coils Coil 872 892 - -
Lal15g0989 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 678 1034 - -
Lal15g0989 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 332 - -
Lal15g0989 1035 PANTHER KINESIN-LIKE PROTEIN KLP-3 340 649 - -
Lal15g0989 1035 SMART ch_5 45 148 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0989 Lal-Chr15 7906324 7918766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0989 384 858 Calmodulin-binding Proteins AT5G65930 35.073 2.07e-67 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0989 15 7906324 7918766 Lal15g0989 15 7906324 7918766 ECH
Lal15g0989 15 7906324 7918766 Lal25g0451 25 3098080 3103820 PCT
Lal25g0451 25 3098080 3103820 Lal15g0989 15 7906324 7918766 PCT