Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0987 ATGGATACCCATTTCCCCTTCCTCAAATTCTTACTCTCCATTGTTTTCTTCTTTATTACTTTACCAAAATACTACTCTCAAAACAATGACACATACTCTATTTGCAACCAACCATTCAATTGTGGATCTCTCACAAACGTGTCCTATCCTTTCTATGGAGAGAACAGACCCCACTATTGTGGCCTAGTTGGGTTCAAACTCATGTGCATGCATAACCAAAACACAACAATTCAGGTTGCTTCACAAAATTTTAATGTACTTCACATTAACCAAGAGGCTAATACAATGAGAATAGTGAGAACAGACTTTGTTTATGATCACTGCTCTTATTCCAACAACTTTACCAACACTTCTTTGAATTCAAGCCCCTTTCATTTTCTCCCAACTGTTCAGAATATCACCATATTCTACAAATGCCCTTCTACTGTTCCAAGCGTGGGTAACACTTTTATATGCCAGAATGATAGCAATGAAAATGGTTTCTATGTAGTTAATAGTACTCAGCTGAAGCAGGAACTAGGGTTTCAGAACTGTAGGGTTAGTACTCAAGTGCAAGTTTCAAATGTTACTGTTTTGGAATCTGAGAGTGGATCTGAGGTGCTGAAGAAAGTGGTGGATGAAGGGTTTGATGTGAGTTTTGTTACAGATTGGTCTTCCCAGTGTAGAACATGCAAGGAATCTGGAGGAACATGTGGAACTAATGAGAATGATTCTTCTCAGTTTTCTTGTTATTGTCAAGGTGGAAGTGGAAATCATGATTCAGCATGTGCAACTAATAAAAGTCGAAAGAAAAAGACAGGTTTGAAGCTGGCTATAGCTTTTGTTGCTAGTGGAATTGGACTACCTCTTATTGCAGTCATTATATGCCGTAACAAAGTTGAGATTTGGAAGTTTATAACATCAAAATTTGGAAACACAAAAAGGACTGATAAAAAAATAGAAGCCTTCCTTGAAAGCCAGTATCCTCTGGGTCTAAAAAGATATAGTTACTCTGAAGTGAAGAAAATGAGTGATTCCTTCAAAGTTAAGCTAGGAGAAGGTGGTTATGGTTCTGTATTCAAAGGAAAACTACTGAATGGTCCTTCTGTAGCTGTAAAGATTCTGAATGAATCAAAAGGAAATGGCGAAGAATTTATCAACGAGGTCGCGAGTATCAGCAAAACATCTCATGTTAATGTTGTTACTCTTCTTGGATTTTGTCTAGAAGGAAGTAAAAAAGCTCTTATCTATGAATTTATGTGCAATGGTTCACTTGAAAAGTTCATTCACAACAAGGAAGTTGTTGCAGCTGAAACTAAACCATCCTTGAGTTGGGATAAGATGTATCAGATTGCAATAGGGATAGCTAAAGGCCTAGAGTACTTGCACAAAGGATGCAACACTCGGATTTTACATTTCGATATCAAACCACATAATATTCTCCTTGACGAAAATTATAGCCCGAAAATATCAGATTTCGGGCTAGCTAAGCTTAGCACAAGGGAAGAGAGCAATGTGTCAATGTCGAATGCAAGAGGGACTATAGGGTATGTAGCTCCAGAAGTGTGGAATAGAAGTTTCGGAGGCGTTTCACATAAGTCAGATGTTTATAGCTACGGAATGATGCTGCTGGAAATGGTTGGAGGGCAGAGGAACATCGAAGTTGAAGCGAGTCGATCAAGCGAGCTATATTTTCCGCATTTGGTGATTTATAAGAAACTTGAGCTAGGAAGTGATTTAGGACTTGAAGGGATGATGTCTATAGAAGAAAATGAGGTTGCAAAGAGAATGACTATGGTGGGGTTATGGTGCATTCAAACATTTCCTTCTGATAGACCTACAATAAGTAGAGTAATTGATATGTTGGAAGGTAACATTGAGTCACTAGAAATGCCACCAAAACCTGTTATTTCTTCTCCACCTAGAAAAACTTTAGATTTTTCAACATCATCAATATCAATGATGCATAGTTCCTAA 1956 0.3778 MDTHFPFLKFLLSIVFFFITLPKYYSQNNDTYSICNQPFNCGSLTNVSYPFYGENRPHYCGLVGFKLMCMHNQNTTIQVASQNFNVLHINQEANTMRIVRTDFVYDHCSYSNNFTNTSLNSSPFHFLPTVQNITIFYKCPSTVPSVGNTFICQNDSNENGFYVVNSTQLKQELGFQNCRVSTQVQVSNVTVLESESGSEVLKKVVDEGFDVSFVTDWSSQCRTCKESGGTCGTNENDSSQFSCYCQGGSGNHDSACATNKSRKKKTGLKLAIAFVASGIGLPLIAVIICRNKVEIWKFITSKFGNTKRTDKKIEAFLESQYPLGLKRYSYSEVKKMSDSFKVKLGEGGYGSVFKGKLLNGPSVAVKILNESKGNGEEFINEVASISKTSHVNVVTLLGFCLEGSKKALIYEFMCNGSLEKFIHNKEVVAAETKPSLSWDKMYQIAIGIAKGLEYLHKGCNTRILHFDIKPHNILLDENYSPKISDFGLAKLSTREESNVSMSNARGTIGYVAPEVWNRSFGGVSHKSDVYSYGMMLLEMVGGQRNIEVEASRSSELYFPHLVIYKKLELGSDLGLEGMMSIEENEVAKRMTMVGLWCIQTFPSDRPTISRVIDMLEGNIESLEMPPKPVISSPPRKTLDFSTSSISMMHSS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0987 651 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 646 IPR045874 GO:0004672
Lal15g0987 651 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 1 646 - -
Lal15g0987 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lal15g0987 651 SUPERFAMILY Protein kinase-like (PK-like) 317 616 IPR011009 -
Lal15g0987 651 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Lal15g0987 651 CDD STKc_IRAK 344 617 - -
Lal15g0987 651 Gene3D Phosphorylase Kinase; domain 1 312 412 - -
Lal15g0987 651 Pfam Wall-associated receptor kinase galacturonan-binding 35 100 IPR025287 GO:0030247
Lal15g0987 651 Pfam Wall-associated receptor kinase C-terminal 152 247 IPR032872 -
Lal15g0987 651 Pfam Protein kinase domain 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0987 651 ProSiteProfiles Protein kinase domain profile. 338 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0987 651 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Lal15g0987 651 SMART serkin_6 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0987 Lal-Chr15 7872128 7878776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0987 34 643 Receptor kinase-like Gene Family AT1G66910 41.548 1.30e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal15g0987 Pkinase 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0987 - - vra:106766588 909.442