Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0979 ATGGGTTTGGTTCGGGCCCAATCAAACAAAACAGGATTGAAAGAGGGGTCAGATTTGGGGTTTCCATTCTTTTGTTTTGTGGTTCTGGGAGAAAGCAAAGGGAGAAGAAGAGAGAAAAGAGAAGACGAAGACGGAGAAAGGATTCACGGGTTTTCTCCTCCGAAGACGGCGGCGGTGTTTTCGTTCCGGCGGCGGGCTAATGAGGAGCTTCTCGTCTGCTCCAACTCCTACTCTCGGTTGTTACTCCGGTTTAGGGCAATGACCACTGCTTTATGGCTTCTTTTGGAATCCCTTTCTGTACTTGGCAATGAGTATAAAGGGCCGAATTGGGTGAGCTTCCTATGCCACTTTTCAACGGTTCAAGCAGCTGGTTGGAAAATGAAGGATAAAACTTTGGAGCAATCTACTGGTTATGAGAATATAGGAACTGCAGTCAGCCGGACAAAATTGGGTGTTCACAGCAGTAATGAGTCAAGTCTGTATAAAGGGAAAATTTTCAATTCTGATGAAATTGCTTACAATTTTTACTCTTTATTTGCAAAGAGTTGTGGTTTTTCGATTAGACAAGGTCACACCTACAAAAATACCAAGAATAATATCAAGGATATTTACAAAAGAGAGTATATTTGTCACCGTGCTAGTATTGCTAAACAACAAAAAGTTGTTGAAGTAAAAAGACAAAGGAGACAGAAAAGTACAAGATACAAATGTAGCGCAAAGTTGATTATTACTAAAAGAACAATTGGCTTTGAGGAACGTTGGGTGATCACACATTTTAGTAATTCTCATAACCATACATTATTGGACAACAAAGAGGTTCATTTTCTTCATGTTTATCGTGACATACCTATCAATGATCAAGGTCGCATATTATTGCTATCAAAAGCTGGATGCTCAGTAAGTATTATAACGAGGGTGCTTGAATTGGATAAGGGGATGAAGGCGGGCGATCTACCATTTTTAGAAAAAGACATTAGAAAATTTCTTCAATCTCACGGTAATGTTGGTAAAGATAACGAGGCTTCAAAGGTTCTAAAATTATGCAAAAGTCTAAAAGATAAAGATGATGTATTCCAATATGATTTTACAATGTATGAAAGTAATAAGTTGGAGGATATTATTTGGGTATTTGGTGATTCTATTCGAGCATATGAAACTTTTGGAGATGTGGTTGTCTTTGATACTATATATCGAATTAATCGTTATGATACGCCTCTTGGACTATGGGTTGGGGTTGATAATCATGGGAATTCATTTTTTTTGGTTGTGTTATATTGCGAAATGAGAAGATATAATCTTTCACATGAGCCTTAA 1314 0.3782 MGLVRAQSNKTGLKEGSDLGFPFFCFVVLGESKGRRREKREDEDGERIHGFSPPKTAAVFSFRRRANEELLVCSNSYSRLLLRFRAMTTALWLLLESLSVLGNEYKGPNWVSFLCHFSTVQAAGWKMKDKTLEQSTGYENIGTAVSRTKLGVHSSNESSLYKGKIFNSDEIAYNFYSLFAKSCGFSIRQGHTYKNTKNNIKDIYKREYICHRASIAKQQKVVEVKRQRRQKSTRYKCSAKLIITKRTIGFEERWVITHFSNSHNHTLLDNKEVHFLHVYRDIPINDQGRILLLSKAGCSVSIITRVLELDKGMKAGDLPFLEKDIRKFLQSHGNVGKDNEASKVLKLCKSLKDKDDVFQYDFTMYESNKLEDIIWVFGDSIRAYETFGDVVVFDTIYRINRYDTPLGLWVGVDNHGNSFFLVVLYCEMRRYNLSHEP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0979 437 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 160 424 IPR031052 GO:0006355
Lal15g0979 437 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 160 424 - -
Lal15g0979 437 Pfam FAR1 DNA-binding domain 174 268 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0979 Lal-Chr15 7766468 7769787 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal15g0979 FAR1 6.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0979 - - var:108339217 400.208