Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0976 ATGGCGAAGAAGGAGTTGGATTGGGGTAGTGGCAGCGCCGGTGGCGTCAGGGAAGTTGATGGAATATGGATGAAGATGATTGACAATGATTATATACAGTTTCTTCACTCTAAAAAAATACGACTCTTATTGGTGAAGGTCTTCTTTTCCATTCCTGAAAGTGTTGCAGCTAAAATCGAGCTACCAGATTCCTTCTATAAGCTTTCAGCTGAAGAGGTGAGAAAAGAAGCTGAATTAAGGAGAAAAAAGCTTGAAGAGTTTCAGCTTTTAATCCCCAAGTCACTTAAAGAAAAACAAGCAAAAACTGCCAGGAAGAGATACACAAAAACTATTATTAGGATTCAGTTTCTAGATGGAGTTGTACTTCAAGGTGTATTTTCTCCACTGGAATCAACTACTGCTCTCTATGAGCTAATCCATCTGGTACTAGTCCAACGGCGGATTATCCCTCGTTTCCCTAAAGCAGGGGAAAAAGCTAAAACAATAGAGGAAGAGGATATGGTACCTTCAGCTCTAGTTAAGTTCAAGCCCCTGGAAACATATTCTGTTGTTTTCACTAGTCTAAGAAATGAATTGCTTGAAATCAGTGAGCCACTTTTAAATGGCTAA 609 0.3957 MAKKELDWGSGSAGGVREVDGIWMKMIDNDYIQFLHSKKIRLLLVKVFFSIPESVAAKIELPDSFYKLSAEEVRKEAELRRKKLEEFQLLIPKSLKEKQAKTARKRYTKTIIRIQFLDGVVLQGVFSPLESTTALYELIHLVLVQRRIIPRFPKAGEKAKTIEEEDMVPSALVKFKPLETYSVVFTSLRNELLEISEPLLNG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0976 202 SUPERFAMILY Ubiquitin-like 78 175 IPR029071 -
Lal15g0976 202 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 45 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0976 Lal-Chr15 7703380 7705094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0976 45 138 C2H2 Transcription Factor Family AT2G01650 67.021 9.19e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0976 K14011 - gmx:100779271 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0976 15 7703380 7705094 Lal15g0976 15 7703380 7705094 ECH
Lal16g0987 16 6568767 6572435 Lal15g0976 15 7703380 7705094 LSH