Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0973 ATGGATGACGTGAAAGACAGAGTCAAAGGTTTCATGAAAAAAGTCAACAACCCTTTTTCCTCTTCATCCTCATCTTCCAAATTCAAAGGCCAAGGTAGAGTCTTGGGTTCTTATTCATCATCATCATTATCCTCTAATTCAATTTCCATTTCAAAACCCATTTCTTCTCCAACGAATTCCAAACCCTTGCTCCAAAAAACCATCAATTCAGATCATAATAGAATCCACAAACCTAAAAAATCCGATCTTGATCGCAAACCAGGAAATGGGTTTGACCCTTTTGATTCTCTGGTCACTACAGGGAAGAGATCTCAAAATGGGTATTCACTGAATGTTTATGAATGCACCGTTTGTGGAAAATCGTTTAGATATGAAGAAGAGGTTTCTGAACATGTAGATAGTTGTTTGAGTAACCGAATTGAAAGTAATGATGCAAATATTGTTGTCTCAGATAAAAATAATGAAGAAGTTGAGTGGAGTAATGGTGAATTGGAGGTTTGTGTTGGTACTTACATATCAAGGAACCCATATGAGGGATCAATTGATGTCGTTCTCAAATTGTTGAGAAATATTGTTCGGGAACCGGAGAATGCGAATTTAGGAGGATCAGGATTAGCAATCCAAGGATCAAGGAGGTTTTTGGTGAGGTTATGGGTGGAGTTGAGGTTCAAAATTACGGAGGAGAATGGGGAGACATGGGCAGTGATGGAGGTTCGTACGGAGGAGCAAATAAAATTGATTAAGAAATCAACTTTGTTACTGGAATCACAACTGGTTCATGTTCAAGAGCCTTCAAAGAGGGAGAATTTGGTGCTTGCAACCTCTGCTGAGATAGATGCAAACACCGCTAAACTGAAGCAAGTTGATAGACAGAGTAAACAGCGGTTTCTTTTGGATGGTGATTGTCTAGGGTTGTATACTGAAACTGAACACTATTGTGGACTTATAATCACTTTTGCAAGGGTTAATAACTAA 975 0.3856 MDDVKDRVKGFMKKVNNPFSSSSSSSKFKGQGRVLGSYSSSSLSSNSISISKPISSPTNSKPLLQKTINSDHNRIHKPKKSDLDRKPGNGFDPFDSLVTTGKRSQNGYSLNVYECTVCGKSFRYEEEVSEHVDSCLSNRIESNDANIVVSDKNNEEVEWSNGELEVCVGTYISRNPYEGSIDVVLKLLRNIVREPENANLGGSGLAIQGSRRFLVRLWVELRFKITEENGETWAVMEVRTEEQIKLIKKSTLLLESQLVHVQEPSKRENLVLATSAEIDANTAKLKQVDRQSKQRFLLDGDCLGLYTETEHYCGLIITFARVNN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0973 324 Gene3D Classic Zinc Finger 109 139 - -
Lal15g0973 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 113 131 IPR013087 -
Lal15g0973 324 MobiDBLite consensus disorder prediction 15 69 - -
Lal15g0973 324 MobiDBLite consensus disorder prediction 1 90 - -
Lal15g0973 324 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 296 - -
Lal15g0973 324 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0973 Lal-Chr15 7693598 7700548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0973 1 296 C2H2 Transcription Factor Family AT2G01650 39.812 1.07e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal15g0973 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0973 K14011 - gmx:100779271 253.832