LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal15g0926	ATGGCACATTATATCACCAGTTTCACTTTCCGATTCCCAAATATAAATCTCATTCAAATCCAAAAACTTATCATTCCCATTCAAATTCTGAATCTTCAAATCCTTATTCCAAATCCCAACATAATAGCTTCCATCAGACCTATGCATCCAAAGTACAAGTCCTCAAGTGAGCAAAAGAGTTTTTTCTCAACCTCAGGAGGTTTCCTTCTTGCTGTTGTCTGTGAAAATATGATAGGTGTTGTGGCTTTACGGCTGAGATTGCATGATAGAGACACTGAAGGGATTTTTTCACATTCCTCATCTGAATTTTTTCTTATTATCTCATGGACATGGTCTTTAGTTGGAGGAGAAGCTGCAGGGGTTGGCAACAACTCCGGTGCAGAGATTTCCTATGTAAACATGCTCCTCCTTGAAAAAGAAGTTGACCCACCTCATCTACTCAGAATCCTTTTGAGAGACGAAGATGATGATGAGTTTCTGCTTTCACTTCTTGATAGAGGCGTTGGTGTTCTGCTTACCAATGAGTACCATAGAAATAGGCTTGGTTTGCCTAATTATCGTTTTCGCAATTTGAACTTGCATTTCTTCATGAAGCAGAGAAACCTTTCAGAGGAATCTTCTAGTGTTAAGCCTGGAGTTAGCTTTCGGTGCAGTGGCATTCGTGCAAGCAATGCTGTGAAGATTGACTTGGAATGCAGCATTTGGCTTACCTCATTCGGTCAAGTTTTGTTGCTTGACTTGGTAGTTGCTTGTTGGCTGGTTTTGTTTGAAATGCTGGACCAGTTATCTTATCTTCAAAATAAGGAACAAATGCTGGTAGAAACAAATAGAGGTTTGGCCATGAAGCTGGAAGAAATCAATTCAAGAAACCAATACAGACAATGGGATGAAGGAGAACAAAGTATGCAATATGATACACAGAATTCTCACTCTCAAGGCTTCTTCCAATCTTTGGAAAGCAATCAGTTAAATGCAACAACTCAAACTCAACAAGGTGCTTTAGCACCTTTTTGCTTAAAAAAAGATTGTATATATGGTGCAAAGGCAACATTTATCTATTTCCAAAATGGGCACAAGACCAAAGGCAATGGTATTCTTGCCTTTGAACACAATGACAACAGTTTTATAACCGTTGCCTTTGAGCACAATGGCAACGGTTTTGACCTTCCCTTTTAG	1176	0.392	MAHYITSFTFRFPNINLIQIQKLIIPIQILNLQILIPNPNIIASIRPMHPKYKSSSEQKSFFSTSGGFLLAVVCENMIGVVALRLRLHDRDTEGIFSHSSSEFFLIISWTWSLVGGEAAGVGNNSGAEISYVNMLLLEKEVDPPHLLRILLRDEDDDEFLLSLLDRGVGVLLTNEYHRNRLGLPNYRFRNLNLHFFMKQRNLSEESSSVKPGVSFRCSGIRASNAVKIDLECSIWLTSFGQVLLLDLVVACWLVLFEMLDQLSYLQNKEQMLVETNRGLAMKLEEINSRNQYRQWDEGEQSMQYDTQNSHSQGFFQSLESNQLNATTQTQQGALAPFCLKKDCIYGAKATFIYFQNGHKTKGNGILAFEHNDNSFITVAFEHNGNGFDLPF	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal15g0926	391	PANTHER	MADS-BOX TRANSCRIPTION FACTOR	258	322	-	-
	Lal15g0926	391	PANTHER	MADS BOX PROTEIN	258	322	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal15g0926	Lal-Chr15	7100833	7103736	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal15g0926	258	321	MADS-box Gene Family	AT5G15800	53.623	4.47e-09	55.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal15g0926	K09264		-	gmx:100785322	104.375