Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0920 ATGGGTGGTGCACCAACATTTCTTCAAGCCATTCGTCGTTTCTTTAATTCACAACAACGTTCTTCTTCTTCTTCTCAAGAACATGTTTCTAACAATAACAATGCTATTTTTGTTAATGATTTGAGTTCTCAATTACCCTCTTTTCCTAATCAGGAAACTGATTTCACCCTTGACGGAGATTTTGATCACTCTGCTTTGAAACATATCAAAGTTCCTACGTCTAACCTTTTTGCTCCTCTTGATTTGTCCATGGATCCTCATAAAAAGGGTGCGCAAGAAACGGAGTTTTTTACTGAGTATGGAGAGGCAAGTCGATACCAGATCCTAGAAGTCGTTGGGAAAGGAAGTTACGGTGTTGTGGGTTCTGCTGTTGACACTCATACTGGCGAAAAGGTTGCAATCAAGAAAATTAATGATGTTTTTGAACATGTATCAGATGCCACACGGATCCTAAGAGAAATTAAACTTCTTCGTTTGCTCAGACATCCTGATATCGTAGAAATTAAGCATATTATGCTTCCTCCTTCCCGACGAGAGTTCAAGGATATTTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTAACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATGCAGCAAATGTATTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTAAAGATATGTGATTTCGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACTCCCGCGATTGATATTTGGAGCATTGGATGCATATTTGCAGAGATGCTCACTGGGAAGCCTTTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTCGGCACTCCTCCCGCTGAGTCTATTGCGAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAGCAGCATGCGAAAAAAACAACCAGTTCCATTGTCTGAAAAATTTCCAAATGCAGATCCGTTGGCTCTTTCTACGCTGGAGCGCCTACTTGCATTTGATCCGAAAGATCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTATTTCAATGGCTTGTCAAATATTGATCGTGAACCATCCACTCAACCCATTTCAAAACTCGAGTTTGAGTTTGAGAGAAGGAAATTGGCGAAAGATGATGTTAGAGAGTTGATTTATAGAGAGATTTTGGAGTATCATCCCCAGATGCTTCAGGAATATATTCGTGGTGGAGATTTAACGAGCTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTACGGCAAAGGTGAGGGAGGTACCCCATTGCAGAGACAACATGCCTCTTTGCCTAGGGAGCGAGTTGTTTCTTCCAAGGATGAAAATAATCAAAACAACGACTTCGAAAAGCCAAGTGGATCGAATCTTCAGAGTCCCCCAGGGTCTGATACGGCGGATGCTGGAAATACACAAAATGGACACTCCAAGACGAGCAACAGCACACGTAGCTTGCTGAAGAGTGCCAGCATTAGTGGTTCGAAGTGTATAGGTGTGAAACAAAGTAAAGATCCAGAGAAGGAGCCCATTACGGAAGTCGGCGACGAGGCAGTAGATGAATTGACACAGGATCTTGCTTCTCTCCATACTTAG 1779 0.4188 MGGAPTFLQAIRRFFNSQQRSSSSSQEHVSNNNNAIFVNDLSSQLPSFPNQETDFTLDGDFDHSALKHIKVPTSNLFAPLDLSMDPHKKGAQETEFFTEYGEASRYQILEVVGKGSYGVVGSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHAANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPAESIARIRNEKARRYLSSMRKKQPVPLSEKFPNADPLALSTLERLLAFDPKDRPTAEEALADPYFNGLSNIDREPSTQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLQEYIRGGDLTSFMYPSGVDRFKRQFAHLEEHYGKGEGGTPLQRQHASLPRERVVSSKDENNQNNDFEKPSGSNLQSPPGSDTADAGNTQNGHSKTSNSTRSLLKSASISGSKCIGVKQSKDPEKEPITEVGDEAVDELTQDLASLHT 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0920 592 Gene3D Phosphorylase Kinase; domain 1 122 443 - -
Lal15g0920 592 SUPERFAMILY Protein kinase-like (PK-like) 102 402 IPR011009 -
Lal15g0920 592 CDD STKc_TDY_MAPK 105 442 - -
Lal15g0920 592 MobiDBLite consensus disorder prediction 510 559 - -
Lal15g0920 592 MobiDBLite consensus disorder prediction 477 592 - -
Lal15g0920 592 MobiDBLite consensus disorder prediction 495 509 - -
Lal15g0920 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 72 529 - -
Lal15g0920 592 Pfam Protein kinase domain 106 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0920 592 ProSitePatterns Protein kinases ATP-binding region signature. 112 136 IPR017441 GO:0005524
Lal15g0920 592 ProSiteProfiles Protein kinase domain profile. 106 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0920 592 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 72 529 - -
Lal15g0920 592 Gene3D Transferase(Phosphotransferase) domain 1 192 420 - -
Lal15g0920 592 ProSitePatterns MAP kinase signature. 141 244 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal15g0920 592 SMART serkin_6 106 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0920 592 MobiDBLite consensus disorder prediction 562 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0920 Lal-Chr15 7038152 7043546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0920 91 592 MAP Kinase Gene Family AT3G18040 80.868 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal15g0920 Pkinase 3.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0920 - - gmx:100780831 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0920 15 7038152 7043546 Lal16g0951 16 6312829 6317938 ECH
Lal15g0920 15 7038152 7043546 Lal15g0920 15 7038152 7043546 ECH
Lal16g0951 16 6312829 6317938 Lal15g0920 15 7038152 7043546 LSH